RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 FRMPD3Q5JV73 1810 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 COL1A2P08123 1366 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 SLC26A4O43511 780 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 EVI5O60447 810 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 PPP6R2O75170 966 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 MUTP22033 750 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 CCT6AP40227 531 aaKnown RBP10.21□□□□□ -0.77
CHD9-219ENST00000569225 CYP4A11Q02928 519 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 GRIK4Q16099 956 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 PTGISQ16647 500 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 UGCGQ16739 394 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 OTUD6AQ7L8S5 288 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 C4orf19Q8IY42 314 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 LINC00301Q8NCQ3 95 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 SNX29Q8TEQ0 813 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 DPF3Q92784 378 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 DYDC2Q96IM9 177 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 CCDC43Q96MW1 224 aaKnown RBP10.21□□□□□ -0.77
CHD9-219ENST00000569225 SCAND2PQ9GZW5 306 aaPredicted RBP10.21□□□□□ -0.77
CHD9-219ENST00000569225 PRKAG2Q9UGJ0 569 aa10.21□□□□□ -0.77
CHD9-219ENST00000569225 SRPRBQ9Y5M8 271 aaKnown RBP10.21□□□□□ -0.77
CHD9-219ENST00000569225 KDM3AQ9Y4C1 1321 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 DDX11L8A8MPP1 907 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 SLITRK3O94933 977 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 LYPLA2O95372 231 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 RPLP2P05387 115 aaKnown RBP10.21□□□□□ -0.78
CHD9-219ENST00000569225 INSRRP14616 1297 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 RPA1P27694 616 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 MARCKSP29966 332 aaPredicted RBP10.21□□□□□ -0.78
CHD9-219ENST00000569225 TXLNAP40222 546 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 UBA7P41226 1012 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 CTTNQ14247 550 aaKnown RBP10.21□□□□□ -0.78
CHD9-219ENST00000569225 IL17AQ16552 155 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 FAM126BQ8IXS8 530 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 KCTD17Q8N5Z5 321 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 CCDC155Q8N6L0 562 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 RASSF8Q8NHQ8 419 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 CDK5RAP3Q96JB5 506 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 SETD4Q9NVD3 440 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 RGL1Q9NZL6 768 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 SEPT9Q9UHD8 586 aaPredicted RBP10.21□□□□□ -0.78
CHD9-219ENST00000569225 FBXO2Q9UK22 296 aaPredicted RBP10.21□□□□□ -0.78
CHD9-219ENST00000569225 PPME1Q9Y570 386 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 NR2E3Q9Y5X4 410 aa10.21□□□□□ -0.78
CHD9-219ENST00000569225 ZNF862O60290 1169 aa10.2□□□□□ -0.78
CHD9-219ENST00000569225 CLTBP09497 229 aa10.2□□□□□ -0.78
CHD9-219ENST00000569225 XRCC6P12956 609 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHD9-219ENST00000569225 ATP4AP20648 1035 aa10.2□□□□□ -0.78
CHD9-219ENST00000569225 HOXC8P31273 242 aa10.2□□□□□ -0.78
CHD9-219ENST00000569225 YWHABP31946 246 aaKnown RBP10.2□□□□□ -0.78
CHD9-219ENST00000569225 ME1P48163 572 aa10.2□□□□□ -0.78
CHD9-219ENST00000569225 GDF6Q6KF10 455 aaPredicted RBP10.2□□□□□ -0.78
CHD9-219ENST00000569225 TAF2Q6P1X5 1199 aa10.2□□□□□ -0.78
CHD9-219ENST00000569225 CATSPER3Q86XQ3 398 aa10.2□□□□□ -0.78
CHD9-219ENST00000569225 EXOC8Q8IYI6 725 aa10.2□□□□□ -0.78
CHD9-219ENST00000569225 LMBR1Q8WVP7 490 aa10.2□□□□□ -0.78
CHD9-219ENST00000569225 SPATA32Q96LK8 384 aa10.2□□□□□ -0.78
CHD9-219ENST00000569225 NACC1Q96RE7 527 aa10.2□□□□□ -0.78
CHD9-219ENST00000569225 NIFKQ9BYG3 293 aaKnown RBP10.2□□□□□ -0.78
CHD9-219ENST00000569225 TRPV6Q9H1D0 765 aa10.2□□□□□ -0.78
CHD9-219ENST00000569225 TRMT13Q9NUP7 481 aaKnown RBP10.2□□□□□ -0.78
CHD9-219ENST00000569225 TUBE1Q9UJT0 475 aa10.2□□□□□ -0.78
CHD9-219ENST00000569225 MAGEB2O15479 319 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 B4GALT4O60513 344 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 CUTAO60888 179 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 CD4P01730 458 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 IGBP1P78318 339 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 PTK7Q13308 1070 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 TRMT1LQ7Z2T5 733 aaKnown RBP10.19□□□□□ -0.78
CHD9-219ENST00000569225 RSPH3Q86UC2 560 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 CABP7Q86V35 215 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 C7orf61Q8IZ16 206 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 CALML4Q96GE6 196 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 JPH2Q9BR39 696 aaPredicted RBP10.19□□□□□ -0.78
CHD9-219ENST00000569225 NT5C3AQ9H0P0 336 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 CSRNP2Q9H175 543 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 ANKEF1Q9NU02 776 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 TMEM39AQ9NV64 488 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 RCOR1Q9UKL0 485 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 MBLAC1A4D2B0 266 aaPredicted RBP10.19□□□□□ -0.78
CHD9-219ENST00000569225 PP2D1A8MPX8 630 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 MED24O75448 989 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 SPATA31C1P0DKV0 1188 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 MLLT1Q03111 559 aaPredicted RBP10.19□□□□□ -0.78
CHD9-219ENST00000569225 TBC1D8BQ0IIM8 1120 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 FAAP100Q0VG06 881 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 BFSP2Q13515 415 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 ZRSR1Q15695 479 aaKnown RBP10.19□□□□□ -0.78
CHD9-219ENST00000569225 CSPP1Q1MSJ5 1256 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 SERINC5Q86VE9 423 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 ZNF579Q8NAF0 562 aaKnown RBP10.19□□□□□ -0.78
CHD9-219ENST00000569225 RETREG2Q8NC44 543 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 PPP1R13LQ8WUF5 828 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 CEP170P1Q96L14 293 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 PRDM5Q9NQX1 630 aaPredicted RBP10.19□□□□□ -0.78
CHD9-219ENST00000569225 CYP26B1Q9NR63 512 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 CCDC39Q9UFE4 941 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 KIAA1024Q9UPX6 916 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 DNM3Q9UQ16 869 aa10.19□□□□□ -0.78
CHD9-219ENST00000569225 CAND2O75155 1236 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms