RNA–Protein interactions for RNA: ENST00000569095.1

CDH11-215, Transcript of cadherin 11, human

TSL 3

Gene CDH11, Length 436 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH11-215	ENST00000569095	PCIF1	Q9H4Z3	704 aa		4.6	□□□□□ -1.67
CDH11-215	ENST00000569095	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.6	□□□□□ -1.67
CDH11-215	ENST00000569095	THG1L	Q9NWX6	298 aa	Known RBP	4.6	□□□□□ -1.67
CDH11-215	ENST00000569095	DTL	Q9NZJ0	730 aa		4.6	□□□□□ -1.67
CDH11-215	ENST00000569095	DUSP10	Q9Y6W6	482 aa		4.6	□□□□□ -1.67
CDH11-215	ENST00000569095	SH3D21	A4FU49	640 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	FAM83G	A6ND36	823 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	FAM90A27P	A6NNH2	459 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	VIL1	P09327	827 aa	Known RBP	4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	PTPN1	P18031	435 aa	Known RBP	4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	GJA4	P35212	333 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	MECP2	P51608	486 aa	Known RBP	4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	KIF11	P52732	1056 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	EPHA5	P54756	1037 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	IGBP1	P78318	339 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	OCRL	Q01968	901 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	SEPT7	Q16181	437 aa	Known RBP	4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	LCE5A	Q5TCM9	118 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	OTOP1	Q7RTM1	612 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	FAM126B	Q8IXS8	530 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	CHTF18	Q8WVB6	975 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	CPA5	Q8WXQ8	436 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	ZSWIM3	Q96MP5	696 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	TTC1	Q99614	292 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	IFT22	Q9H7X7	185 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	KCNH7	Q9NS40	1196 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	NTM	Q9P121	344 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	MCM8	Q9UJA3	840 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	TELO2	Q9Y4R8	837 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	COL4A3BP	Q9Y5P4	624 aa		4.59	□□□□□ -1.67
CDH11-215	ENST00000569095	hCG_2014768	A0A024R1R8	64 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	FKBP9	O95302	570 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	ZBTB48	P10074	688 aa	Predicted RBP	4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	ATP2A2	P16615	1042 aa	Known RBP	4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	FAH	P16930	419 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	SLC9A1	P19634	815 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	SARS	P49591	514 aa	Known RBP	4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	GJA9	P57773	515 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	ANAPC15	P60006	121 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	KRTAP10-2	P60368	255 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	CAP1	Q01518	475 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	DHCR24	Q15392	516 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	ERICH6B	Q5W0A0	696 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	TEPP	Q6URK8	271 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	TTLL7	Q6ZT98	887 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	FKBP9P1	Q75LS8	142 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	STRA8	Q7Z7C7	330 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	ZNF761	Q86XN6	746 aa	Predicted RBP	4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	MIB1	Q86YT6	1006 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	PCDH12	Q9NPG4	1184 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	OXSM	Q9NWU1	459 aa		4.58	□□□□□ -1.68
CDH11-215	ENST00000569095	ACOT7	O00154	380 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	ZEB2	O60315	1214 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	BRINP1	O60477	761 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	LRG1	P02750	347 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	AMPD3	Q01432	767 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	DSG1	Q02413	1049 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	ATP13A4	Q4VNC1	1196 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	NOSTRIN	Q8IVI9	506 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	KIAA1958	Q8N8K9	716 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	SMC1B	Q8NDV3	1235 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	TTLL11	Q8NHH1	800 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	WDR66	Q8TBY9	1149 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	ADAMTS17	Q8TE56	1095 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	ERCC4	Q92889	916 aa	Predicted RBP	4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	SCYL1	Q96KG9	808 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	PCDH18	Q9HCL0	1135 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	ACSS2	Q9NR19	701 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	TOMM22	Q9NS69	142 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	ARHGAP28	Q9P2N2	729 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	NOP58	Q9Y2X3	529 aa	Known RBP	4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	B3GALT1	Q9Y5Z6	326 aa		4.57	□□□□□ -1.68
CDH11-215	ENST00000569095	UNC13A	Q9UPW8	1703 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	FOXP2	O15409	715 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	NOBOX	O60393	691 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	RAB11FIP3	O75154	756 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	CYP17A1	P05093	508 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	ENO2	P09104	434 aa	Predicted RBP	4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	THBS2	P35442	1172 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	ADCYAP1R1	P41586	468 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	LSS	P48449	732 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	ITGA1	P56199	1179 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	MCTP2	Q6DN12	878 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	VASN	Q6EMK4	673 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	TMC5	Q6UXY8	1006 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	AFAP1L2	Q8N4X5	818 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	HIPK4	Q8NE63	616 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	WDR48	Q8TAF3	677 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	DLG3	Q92796	817 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	GBP4	Q96PP9	640 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	SPTLC3	Q9NUV7	552 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	ATP8A1	Q9Y2Q0	1164 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	SPO11	Q9Y5K1	396 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	RB1CC1	Q8TDY2	1594 aa		4.56	□□□□□ -1.68
CDH11-215	ENST00000569095	NEMP1	O14524	444 aa		4.55	□□□□□ -1.68

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