RNA–Protein interactions for RNA: ENST00000569095.1

CDH11-215, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 436 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-215ENST00000569095 AEBP2Q6ZN18 517 aaPredicted RBP18.82■□□□□ 0.6
CDH11-215ENST00000569095 CHIC1Q5VXU3 224 aa18.03■□□□□ 0.48
CDH11-215ENST00000569095 SENP3Q9H4L4 574 aaPredicted RBP15.95■□□□□ 0.14
CDH11-215ENST00000569095 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
CDH11-215ENST00000569095 FOXD1Q16676 465 aa14.89□□□□□ -0.03
CDH11-215ENST00000569095 PLPPR3Q6T4P5 718 aa14.5□□□□□ -0.09
CDH11-215ENST00000569095 PPP6R1Q9UPN7 881 aa14.12□□□□□ -0.15
CDH11-215ENST00000569095 ADRA2BP18089 450 aa14.11□□□□□ -0.15
CDH11-215ENST00000569095 PIAS4Q8N2W9 510 aaPredicted RBP14□□□□□ -0.17
CDH11-215ENST00000569095 MSH5O43196 834 aa13.78□□□□□ -0.2
CDH11-215ENST00000569095 POTEDQ86YR6 584 aa13.14□□□□□ -0.31
CDH11-215ENST00000569095 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
CDH11-215ENST00000569095 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
CDH11-215ENST00000569095 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
CDH11-215ENST00000569095 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
CDH11-215ENST00000569095 CNKSR2Q8WXI2 1034 aa12.44□□□□□ -0.42
CDH11-215ENST00000569095 NCBP3Q53F19 620 aaKnown RBP12.3□□□□□ -0.44
CDH11-215ENST00000569095 DCAF8L1A6NGE4 600 aa12.29□□□□□ -0.44
CDH11-215ENST00000569095 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
CDH11-215ENST00000569095 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
CDH11-215ENST00000569095 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
CDH11-215ENST00000569095 KCNA4P22459 653 aa12.19□□□□□ -0.46
CDH11-215ENST00000569095 RNF39Q9H2S5 420 aa11.8□□□□□ -0.52
CDH11-215ENST00000569095 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDH11-215ENST00000569095 CACNB1Q02641 598 aaPredicted RBP11.76□□□□□ -0.53
CDH11-215ENST00000569095 DNAJC5BQ9UF47 199 aa11.7□□□□□ -0.54
CDH11-215ENST00000569095 C1QBPQ07021 282 aaKnown RBP11.61□□□□□ -0.55
CDH11-215ENST00000569095 SLC4A2P04920 1241 aa11.58□□□□□ -0.56
CDH11-215ENST00000569095 U3KPZ7 1027 aaPredicted RBP11.56□□□□□ -0.56
CDH11-215ENST00000569095 SLC4A1APQ9BWU0 796 aaKnown RBP11.54□□□□□ -0.56
CDH11-215ENST00000569095 SPINK5Q9NQ38 1064 aaPredicted RBP11.36□□□□□ -0.59
CDH11-215ENST00000569095 CAPN15O75808 1086 aa11.33□□□□□ -0.6
CDH11-215ENST00000569095 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
CDH11-215ENST00000569095 MYCNP04198 464 aaPredicted RBP11.24□□□□□ -0.61
CDH11-215ENST00000569095 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.22□□□□□ -0.61
CDH11-215ENST00000569095 ZBTB22O15209 634 aa11.22□□□□□ -0.61
CDH11-215ENST00000569095 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
CDH11-215ENST00000569095 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
CDH11-215ENST00000569095 SAMD1Q6SPF0 538 aaPredicted RBP11.19□□□□□ -0.62
CDH11-215ENST00000569095 APLP2Q06481 763 aa11.16□□□□□ -0.62
CDH11-215ENST00000569095 DSG3P32926 999 aa11.15□□□□□ -0.62
CDH11-215ENST00000569095 ABCB7O75027 752 aa11.13□□□□□ -0.63
CDH11-215ENST00000569095 ZNF219Q9P2Y4 722 aaPredicted RBP11.1□□□□□ -0.63
CDH11-215ENST00000569095 ATF5Q9Y2D1 282 aaPredicted RBP11.04□□□□□ -0.64
CDH11-215ENST00000569095 EHMT2Q96KQ7 1210 aa10.97□□□□□ -0.65
CDH11-215ENST00000569095 POLA2Q14181 598 aa10.92□□□□□ -0.66
CDH11-215ENST00000569095 CSRNP3Q8WYN3 585 aa10.88□□□□□ -0.67
CDH11-215ENST00000569095 ATXN8OSP0DMR3 200 aa10.8□□□□□ -0.68
CDH11-215ENST00000569095 ZBTB12Q9Y330 459 aaPredicted RBP10.63□□□□□ -0.71
CDH11-215ENST00000569095 OSCARQ8IYS5 282 aa10.61□□□□□ -0.71
CDH11-215ENST00000569095 RBM42Q9BTD8 480 aaKnown RBP10.59□□□□□ -0.71
CDH11-215ENST00000569095 FBLN2P98095 1184 aa10.53□□□□□ -0.72
CDH11-215ENST00000569095 MKRN4PQ13434 485 aaPredicted RBP10.51□□□□□ -0.73
CDH11-215ENST00000569095 AKT1S1Q96B36 256 aa10.4□□□□□ -0.74
CDH11-215ENST00000569095 SPDYE2BA6NHP3 402 aa10.34□□□□□ -0.75
CDH11-215ENST00000569095 SPDYE6P0CI01 402 aa10.34□□□□□ -0.75
CDH11-215ENST00000569095 SPDYE2Q495Y8 402 aa10.34□□□□□ -0.75
CDH11-215ENST00000569095 REM2Q8IYK8 340 aaPredicted RBP10.34□□□□□ -0.75
CDH11-215ENST00000569095 POTEHQ6S545 545 aa10.33□□□□□ -0.76
CDH11-215ENST00000569095 CHRDL2Q6WN34 429 aa10.32□□□□□ -0.76
CDH11-215ENST00000569095 ZNF692Q9BU19 519 aaPredicted RBP10.31□□□□□ -0.76
CDH11-215ENST00000569095 PITPNM1O00562 1244 aa10.26□□□□□ -0.77
CDH11-215ENST00000569095 SSUH2Q9Y2M2 353 aa10.24□□□□□ -0.77
CDH11-215ENST00000569095 PABPN1Q86U42 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDH11-215ENST00000569095 CLEC11AQ9Y240 323 aa10.19□□□□□ -0.78
CDH11-215ENST00000569095 SPDYE4A6NLX3 237 aa10.13□□□□□ -0.79
CDH11-215ENST00000569095 PIP4P2Q8N4L2 257 aa10.13□□□□□ -0.79
CDH11-215ENST00000569095 SPDYE1Q8NFV5 336 aaPredicted RBP10.13□□□□□ -0.79
CDH11-215ENST00000569095 FXR2P51116 673 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDH11-215ENST00000569095 PRKAR2AP13861 404 aaKnown RBP10□□□□□ -0.81
CDH11-215ENST00000569095 PRR29P0C7W0 189 aa9.99□□□□□ -0.81
CDH11-215ENST00000569095 CHADLQ6NUI6 762 aa9.98□□□□□ -0.81
CDH11-215ENST00000569095 HAX1O00165 279 aa9.91□□□□□ -0.82
CDH11-215ENST00000569095 FKBP8Q14318 412 aa9.9□□□□□ -0.82
CDH11-215ENST00000569095 STAG3Q9UJ98 1225 aa9.86□□□□□ -0.83
CDH11-215ENST00000569095 PROM2Q8N271 834 aa9.83□□□□□ -0.84
CDH11-215ENST00000569095 EVX2Q03828 476 aa9.82□□□□□ -0.84
CDH11-215ENST00000569095 CREBZFQ9NS37 354 aa9.8□□□□□ -0.84
CDH11-215ENST00000569095 SP7Q8TDD2 431 aaPredicted RBP9.78□□□□□ -0.84
CDH11-215ENST00000569095 FARP1Q9Y4F1 1045 aaPredicted RBP9.78□□□□□ -0.84
CDH11-215ENST00000569095 C19orf67A6NJJ6 358 aa9.74□□□□□ -0.85
CDH11-215ENST00000569095 CD44P16070 742 aaKnown RBP9.7□□□□□ -0.86
CDH11-215ENST00000569095 MNX1P50219 401 aaPredicted RBP9.64□□□□□ -0.87
CDH11-215ENST00000569095 MIER1Q8N108 512 aa9.64□□□□□ -0.87
CDH11-215ENST00000569095 PLCD3Q8N3E9 789 aa9.61□□□□□ -0.87
CDH11-215ENST00000569095 ZRANB1Q9UGI0 708 aa9.61□□□□□ -0.87
CDH11-215ENST00000569095 NPM1P06748 294 aaKnown RBP eCLIP9.59□□□□□ -0.87
CDH11-215ENST00000569095 GABBR2O75899 941 aa9.57□□□□□ -0.88
CDH11-215ENST00000569095 PLEKHG5O94827 1062 aa9.57□□□□□ -0.88
CDH11-215ENST00000569095 PAK3O75914 559 aaPredicted RBP9.54□□□□□ -0.88
CDH11-215ENST00000569095 TSPYL2Q9H2G4 693 aaPredicted RBP9.53□□□□□ -0.88
CDH11-215ENST00000569095 PHF12Q96QT6 1004 aa9.52□□□□□ -0.89
CDH11-215ENST00000569095 FBXO3Q9UK99 471 aa9.52□□□□□ -0.89
CDH11-215ENST00000569095 ZNF579Q8NAF0 562 aaKnown RBP9.51□□□□□ -0.89
CDH11-215ENST00000569095 RASEFQ8IZ41 740 aa9.47□□□□□ -0.89
CDH11-215ENST00000569095 VASPP50552 380 aaPredicted RBP9.46□□□□□ -0.9
CDH11-215ENST00000569095 GALR2O43603 387 aaPredicted RBP9.45□□□□□ -0.9
CDH11-215ENST00000569095 ZBTB47Q9UFB7 747 aaPredicted RBP9.43□□□□□ -0.9
CDH11-215ENST00000569095 KLHL34Q8N239 644 aa9.41□□□□□ -0.9
CDH11-215ENST00000569095 NUBP1P53384 320 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms