RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SNRNP48Q6IEG0 339 aaKnown RBP16.23■□□□□ 0.19
COMMD4-221ENST00000567935 B3GNT9Q6UX72 402 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 GADL1Q6ZQY3 521 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 TMC6Q7Z403 805 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 KCNK18Q7Z418 384 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 PRRT2Q7Z6L0 340 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-221ENST00000567935 ANKRD13CQ8N6S4 541 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 SYT2Q8N9I0 419 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-221ENST00000567935 CYP2W1Q8TAV3 490 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 SMCR8Q8TEV9 937 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-221ENST00000567935 P2RX5Q93086 422 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 LBHD1Q9BQE6 289 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-221ENST00000567935 EIF2AK1Q9BQI3 630 aaKnown RBP16.23■□□□□ 0.19
COMMD4-221ENST00000567935 TBC1D22BQ9NU19 505 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 COL20A1Q9P218 1284 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 FBXO40Q9UH90 709 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 SPDYE16A6NNV3 312 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-221ENST00000567935 EYA4O95677 639 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 CCND2P30279 289 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 COPB2P35606 906 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 SLC12A3P55017 1021 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 STX17P56962 302 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 PABPC4Q13310 644 aaKnown RBP eCLIP16.22■□□□□ 0.191e-6■■□□□ 13.1
COMMD4-221ENST00000567935 SHHQ15465 462 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 CCDC144BQ3MJ40 725 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 TTI2Q6NXR4 508 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 LBX2Q6XYB7 198 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 FILIP1Q7Z7B0 1213 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 GPBP1Q86WP2 473 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 LRRC8AQ8IWT6 810 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 CCDC112Q8NEF3 446 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 GJA10Q969M2 543 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 DNAJC19Q96DA6 116 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 RMDN3Q96TC7 470 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 HSD17B14Q9BPX1 270 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 PDCD2LQ9BRP1 358 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 KCNF1Q9H3M0 494 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 PXMP2Q9NR77 195 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 HOMER2Q9NSB8 354 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 KCND2Q9NZV8 630 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 MAGEC2Q9UBF1 373 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-221ENST00000567935 TCEAL9Q9UHQ7 104 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 NRBP1Q9UHY1 535 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 A0A0G2JMZ2 1700 aa16.22■□□□□ 0.19
COMMD4-221ENST00000567935 FRMD3A2A2Y4 597 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 IDEP14735 1019 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 ITGB5P18084 799 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 CYP11B2P19099 503 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 SFPQP23246 707 aaKnown RBP eCLIP16.21■□□□□ 0.19
COMMD4-221ENST00000567935 LRRC63Q05C16 580 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 STK4Q13043 487 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 NR1I3Q14994 352 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 TMEM132BQ14DG7 1078 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 PGM5Q15124 567 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 C9orf50Q5SZB4 431 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 ARHGEF16Q5VV41 709 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 CENPPQ6IPU0 288 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 POTEGQ6S5H5 508 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 POTEEQ6S8J3 1075 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 NSMFQ6X4W1 530 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 SLC30A10Q6XR72 485 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 FASTKD5Q7L8L6 764 aaKnown RBP16.21■□□□□ 0.19
COMMD4-221ENST00000567935 NLRX1Q86UT6 975 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 RDM1Q8NG50 284 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 KIAA1524Q8TCG1 905 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 NSUN6Q8TEA1 469 aaKnown RBP16.21■□□□□ 0.19
COMMD4-221ENST00000567935 TRIB2Q92519 343 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 GPRASP2Q96D09 838 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 CDHR1Q96JP9 859 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 KCNH7Q9NS40 1196 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 PANK4Q9NVE7 773 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 ADD3Q9UEY8 706 aaKnown RBP16.21■□□□□ 0.19
COMMD4-221ENST00000567935 GJD2Q9UKL4 321 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 SLC45A1Q9Y2W3 748 aa16.21■□□□□ 0.19
COMMD4-221ENST00000567935 E9PMD0 336 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 SSBP05455 408 aaKnown RBP eCLIP16.2■□□□□ 0.18
COMMD4-221ENST00000567935 KRT18P05783 430 aaKnown RBP16.2■□□□□ 0.18
COMMD4-221ENST00000567935 TPM2P07951 284 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 ARP10275 920 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 KCNJ6P48051 423 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 COASYQ13057 564 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 MTMR1Q13613 665 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 BAATQ14032 418 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-221ENST00000567935 TCP11X2Q5H9J9 407 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 FAM26FQ5R3K3 315 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 MAP3K21Q5TCX8 1036 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 SPECC1LQ69YQ0 1117 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 DYMQ7RTS9 669 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 APTXQ7Z2E3 356 aaKnown RBP16.2■□□□□ 0.18
COMMD4-221ENST00000567935 KIAA0895Q8NCT3 520 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 CACTINQ8WUQ7 758 aaKnown RBP16.2■□□□□ 0.18
COMMD4-221ENST00000567935 NAP1L5Q96NT1 182 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-221ENST00000567935 NACC1Q96RE7 527 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 TAAR1Q96RJ0 339 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 TSG101Q99816 390 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 AGO4Q9HCK5 861 aaKnown RBP16.2■□□□□ 0.18
COMMD4-221ENST00000567935 SPTLC3Q9NUV7 552 aa16.2■□□□□ 0.18
COMMD4-221ENST00000567935 ITIH6Q6UXX5 1313 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 SYNGAP1Q96PV0 1343 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 KCNJ18B7U540 433 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms