RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 DDX39AO00148 427 aaKnown RBP18.78■□□□□ 0.6
CLN6-208ENST00000567060 HAS3O00219 553 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 YEATS4O95619 227 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 CSF2RAP15509 400 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 MUTP22033 750 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 TXKP42681 527 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 NASPP49321 788 aaPredicted RBP18.78■□□□□ 0.6
CLN6-208ENST00000567060 SPIRE1Q08AE8 756 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 PKP1Q13835 747 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 ADGRE1Q14246 886 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 EPHA7Q15375 998 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 SF3A1Q15459 793 aaKnown RBP18.78■□□□□ 0.6
CLN6-208ENST00000567060 NFRKBQ6P4R8 1299 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 CXCL17Q6UXB2 119 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 DTHD1Q6ZMT9 781 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 SESTD1Q86VW0 696 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 ATXN2LQ8WWM7 1075 aaKnown RBP18.78■□□□□ 0.6
CLN6-208ENST00000567060 ATP6V0A1Q93050 837 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 TUT1Q9H6E5 874 aaKnown RBP18.78■□□□□ 0.6
CLN6-208ENST00000567060 BCAS3Q9H6U6 928 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 SAMM50Q9Y512 469 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 MYH9P35579 1960 aaKnown RBP18.77■□□□□ 0.6
CLN6-208ENST00000567060 SLC26A4O43511 780 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 ACRP10323 421 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 PTGS1P23219 599 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 STAT5BP51692 787 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 SP4Q02446 784 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 NBR1Q14596 966 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 HAUS3Q68CZ6 603 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 ZNF365Q70YC5 407 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 KCTD17Q8N5Z5 321 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 ERMNQ8TAM6 284 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 GLG1Q92896 1179 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 FAM167AQ96KS9 214 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 AK8Q96MA6 479 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 ASB2Q96Q27 587 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 ZNF302Q9NR11 478 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 ZDHHC9Q9Y397 364 aa18.77■□□□□ 0.6
CLN6-208ENST00000567060 MAFBQ9Y5Q3 323 aaPredicted RBP18.77■□□□□ 0.6
CLN6-208ENST00000567060 BACH1O14867 736 aa18.76■□□□□ 0.59
CLN6-208ENST00000567060 P4HBP07237 508 aaKnown RBP18.76■□□□□ 0.59
CLN6-208ENST00000567060 PPIGQ13427 754 aaKnown RBP eCLIP18.76■□□□□ 0.597e-7■□□□□ 9.4
CLN6-208ENST00000567060 SLC39A14Q15043 492 aa18.76■□□□□ 0.59
CLN6-208ENST00000567060 PTPAQ15257 358 aa18.76■□□□□ 0.59
CLN6-208ENST00000567060 IGSF22Q8N9C0 903 aa18.76■□□□□ 0.59
CLN6-208ENST00000567060 SLC43A3Q8NBI5 491 aa18.76■□□□□ 0.59
CLN6-208ENST00000567060 KAT2BQ92831 832 aa18.76■□□□□ 0.59
CLN6-208ENST00000567060 USP28Q96RU2 1077 aa18.76■□□□□ 0.59
CLN6-208ENST00000567060 CHMP5Q9NZZ3 219 aa18.76■□□□□ 0.59
CLN6-208ENST00000567060 IGSF9BQ9UPX0 1349 aa18.75■□□□□ 0.59
CLN6-208ENST00000567060 WDR81Q562E7 1941 aa18.75■□□□□ 0.59
CLN6-208ENST00000567060 ARVCFO00192 962 aa18.75■□□□□ 0.59
CLN6-208ENST00000567060 SORBS3O60504 671 aa18.75■□□□□ 0.59
CLN6-208ENST00000567060 PPP6R2O75170 966 aa18.75■□□□□ 0.59
CLN6-208ENST00000567060 PSEN2P49810 448 aa18.75■□□□□ 0.59
CLN6-208ENST00000567060 PSMC5P62195 406 aa18.75■□□□□ 0.59
CLN6-208ENST00000567060 KRT85P78386 507 aa18.75■□□□□ 0.59
CLN6-208ENST00000567060 ITGA7Q13683 1181 aa18.75■□□□□ 0.59
CLN6-208ENST00000567060 MFSD10Q14728 455 aa18.75■□□□□ 0.59
CLN6-208ENST00000567060 FAM126BQ8IXS8 530 aa18.75■□□□□ 0.59
CLN6-208ENST00000567060 VTI1AQ96AJ9 217 aa18.75■□□□□ 0.59
CLN6-208ENST00000567060 GAS2L1Q99501 681 aaPredicted RBP18.75■□□□□ 0.59
CLN6-208ENST00000567060 PPME1Q9Y570 386 aa18.75■□□□□ 0.59
CLN6-208ENST00000567060 CHMP2AO43633 222 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 CD4P01730 458 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 ZNF286BP0CG31 522 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 GNAT1P11488 350 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 LONP1P36776 959 aaKnown RBP18.74■□□□□ 0.59
CLN6-208ENST00000567060 TECP42680 631 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 QARSP47897 775 aaKnown RBP18.74■□□□□ 0.59
CLN6-208ENST00000567060 KIAA0753Q2KHM9 967 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 UTP14CQ5TAP6 766 aaKnown RBP18.74■□□□□ 0.59
CLN6-208ENST00000567060 NCAPH2Q6IBW4 605 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 SWSAP1Q6NVH7 229 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 PDXDC2PQ6P474 469 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 CCDC60Q8IWA6 550 aaPredicted RBP18.74■□□□□ 0.59
CLN6-208ENST00000567060 TMEM199Q8N511 208 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 LINC00301Q8NCQ3 95 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 KCNG4Q8TDN1 519 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 BBXQ8WY36 941 aaPredicted RBP18.74■□□□□ 0.59
CLN6-208ENST00000567060 GJA10Q969M2 543 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 PCYT2Q99447 389 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 PPP1R12CQ9BZL4 782 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 TUFT1Q9NNX1 390 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 CXXC1Q9P0U4 656 aaPredicted RBP18.74■□□□□ 0.59
CLN6-208ENST00000567060 CLIC4Q9Y696 253 aa18.74■□□□□ 0.59
CLN6-208ENST00000567060 COL1A2P08123 1366 aa18.73■□□□□ 0.59
CLN6-208ENST00000567060 HBP1O60381 514 aa18.73■□□□□ 0.59
CLN6-208ENST00000567060 LYPLA2O95372 231 aa18.73■□□□□ 0.59
CLN6-208ENST00000567060 CYP2C18P33260 490 aa18.73■□□□□ 0.59
CLN6-208ENST00000567060 STK38Q15208 465 aa18.73■□□□□ 0.59
CLN6-208ENST00000567060 CCDC85BQ15834 202 aaPredicted RBP18.73■□□□□ 0.59
CLN6-208ENST00000567060 FAM173BQ6P4H8 233 aa18.73■□□□□ 0.59
CLN6-208ENST00000567060 C4orf19Q8IY42 314 aa18.73■□□□□ 0.59
CLN6-208ENST00000567060 ATP8B4Q8TF62 1192 aa18.73■□□□□ 0.59
CLN6-208ENST00000567060 HSD17B14Q9BPX1 270 aa18.73■□□□□ 0.59
CLN6-208ENST00000567060 POLR3CQ9BUI4 534 aaPredicted RBP18.73■□□□□ 0.59
CLN6-208ENST00000567060 SCAND2PQ9GZW5 306 aaPredicted RBP18.73■□□□□ 0.59
CLN6-208ENST00000567060 ZSWIM4Q9H7M6 989 aa18.73■□□□□ 0.59
CLN6-208ENST00000567060 THEGQ9P2T0 379 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms