RNA–Protein interactions for RNA: ENST00000565628.1

SPIRE2-208, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 3

Gene SPIRE2, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-208ENST00000565628 PCDHA2Q9Y5H9 948 aa16.48■□□□□ 0.23
SPIRE2-208ENST00000565628 COL1A2P08123 1366 aa16.48■□□□□ 0.23
SPIRE2-208ENST00000565628 ABHD14A-ACY1A0A1B0GW23 586 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 H3BQV1 296 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 MAGEB2O15479 319 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 SLC37A4O43826 429 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 NEMFO60524 1076 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 CXCL10P02778 98 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 KCNJ6P48051 423 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 TRAPPC10P48553 1259 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 PPP2R5CQ13362 524 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 CALCRLQ16602 461 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 MARCH8Q5T0T0 291 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 FAM109BQ6ICB4 259 aaPredicted RBP16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 CNKSR3Q6P9H4 555 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 FAM43BQ6ZT52 329 aaPredicted RBP16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 NOSTRINQ8IVI9 506 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 ZNF710Q8N1W2 664 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 PHOSPHO2Q8TCD6 241 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 PCDHA12Q9UN75 941 aa16.47■□□□□ 0.23
SPIRE2-208ENST00000565628 TRIOBPQ9H2D6 2365 aa16.46■□□□□ 0.23
SPIRE2-208ENST00000565628 SMIM35A0A1B0GVV1 85 aa16.46■□□□□ 0.23
SPIRE2-208ENST00000565628 KIF28PB7ZC32 967 aa16.46■□□□□ 0.23
SPIRE2-208ENST00000565628 SOX1O00570 391 aaPredicted RBP16.46■□□□□ 0.23
SPIRE2-208ENST00000565628 KLRC1P26715 233 aa16.46■□□□□ 0.23
SPIRE2-208ENST00000565628 TMOD1P28289 359 aa16.46■□□□□ 0.23
SPIRE2-208ENST00000565628 RAB30Q15771 203 aa16.46■□□□□ 0.23
SPIRE2-208ENST00000565628 EARS2Q5JPH6 523 aaKnown RBP16.46■□□□□ 0.23
SPIRE2-208ENST00000565628 FAM26DQ5JW98 314 aa16.46■□□□□ 0.23
SPIRE2-208ENST00000565628 USP38Q8NB14 1042 aa16.46■□□□□ 0.23
SPIRE2-208ENST00000565628 SEPT8Q92599 483 aa16.46■□□□□ 0.23
SPIRE2-208ENST00000565628 LRCH3Q96II8 777 aa16.46■□□□□ 0.23
SPIRE2-208ENST00000565628 MSRAQ9UJ68 235 aa16.46■□□□□ 0.23
SPIRE2-208ENST00000565628 LAMA3Q16787 3333 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 TMEM265A0A087WTH1 108 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 NBNO60934 754 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 OATP04181 439 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 P4HBP07237 508 aaKnown RBP16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 CTSHP09668 335 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 ATP2A2P16615 1042 aaKnown RBP16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 PSMC5P62195 406 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 XKR3Q5GH77 459 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 ZNF697Q5TEC3 545 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 MTHFD1LQ6UB35 978 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 B3GNT9Q6UX72 402 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 TRMT1LQ7Z2T5 733 aaKnown RBP16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 EXOC8Q8IYI6 725 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 DNAJB3Q8WWF6 145 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 APBB2Q92870 758 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 WNT8BQ93098 351 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 SLC9A7Q96T83 725 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 FAM49AQ9H0Q0 323 aaPredicted RBP16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 IGSF9BQ9UPX0 1349 aa16.45■□□□□ 0.22
SPIRE2-208ENST00000565628 ATP2B1P20020 1258 aa16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 PDCP20941 246 aa16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 U2AF2P26368 475 aaKnown RBP eCLIP16.44■□□□□ 0.221e-10■■■□□ 17.9
SPIRE2-208ENST00000565628 GJB2P29033 226 aa16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 QARSP47897 775 aaKnown RBP16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 CDC42EP1Q00587 391 aa16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 PRKCEQ02156 737 aa16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 EPHA7Q15375 998 aa16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 MCTP1Q6DN14 999 aa16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 POTEDQ86YR6 584 aa16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 METTL13Q8N6R0 699 aa16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 HAS1Q92839 578 aa16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 GJA10Q969M2 543 aa16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 JPH2Q9BR39 696 aaPredicted RBP16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 CXXC1Q9P0U4 656 aaPredicted RBP16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 SQORQ9Y6N5 450 aa16.44■□□□□ 0.22
SPIRE2-208ENST00000565628 FAM205CA6NFA0 338 aa16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 CD2BP2O95400 341 aaKnown RBP16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 ATP4AP20648 1035 aa16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 MCM7P33993 719 aa16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 DNM2P50570 870 aa16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 MRPS6P82932 125 aaKnown RBP16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 PLEKHG4Q58EX7 1191 aa16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 ODR4Q5SWX8 454 aa16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 LARP1BQ659C4 914 aaKnown RBP16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 TRAF7Q6Q0C0 670 aa16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 RUFY4Q6ZNE9 571 aa16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 OTUD6AQ7L8S5 288 aa16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 DEFB123Q8N688 67 aa16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 MAP7D2Q96T17 732 aa16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 TTC12Q9H892 705 aaPredicted RBP16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 VAV3Q9UKW4 847 aa16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 PPME1Q9Y570 386 aa16.43■□□□□ 0.22
SPIRE2-208ENST00000565628 DDX11L8A8MPP1 907 aa16.42■□□□□ 0.22
SPIRE2-208ENST00000565628 CHRNA1P02708 482 aa16.42■□□□□ 0.22
SPIRE2-208ENST00000565628 TXKP42681 527 aa16.42■□□□□ 0.22
SPIRE2-208ENST00000565628 TBC1D8BQ0IIM8 1120 aa16.42■□□□□ 0.22
SPIRE2-208ENST00000565628 TTC38Q5R3I4 469 aa16.42■□□□□ 0.22
SPIRE2-208ENST00000565628 NCAPH2Q6IBW4 605 aa16.42■□□□□ 0.22
SPIRE2-208ENST00000565628 DBF4BQ8NFT6 615 aa16.42■□□□□ 0.22
SPIRE2-208ENST00000565628 NEK9Q8TD19 979 aa16.42■□□□□ 0.22
SPIRE2-208ENST00000565628 TRAPPC12Q8WVT3 735 aa16.42■□□□□ 0.22
SPIRE2-208ENST00000565628 TIFAQ96CG3 184 aa16.42■□□□□ 0.22
SPIRE2-208ENST00000565628 VWCEQ96DN2 955 aa16.42■□□□□ 0.22
SPIRE2-208ENST00000565628 ZBED2Q9BTP6 218 aa16.42■□□□□ 0.22
SPIRE2-208ENST00000565628 NIFKQ9BYG3 293 aaKnown RBP16.42■□□□□ 0.22
SPIRE2-208ENST00000565628 IFIH1Q9BYX4 1025 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms