RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CYP21A2P08686 494 aa21.28■■□□□ 1
TPM1-226ENST00000560959 AVPR2P30518 371 aa21.28■■□□□ 1
TPM1-226ENST00000560959 KIF5BP33176 963 aa21.28■■□□□ 1
TPM1-226ENST00000560959 PAK2Q13177 524 aa21.28■■□□□ 1
TPM1-226ENST00000560959 MTMR1Q13613 665 aa21.28■■□□□ 1
TPM1-226ENST00000560959 NCOA7Q8NI08 942 aa21.28■■□□□ 1
TPM1-226ENST00000560959 IGDCC4Q8TDY8 1250 aa21.28■■□□□ 1
TPM1-226ENST00000560959 CELF4Q9BZC1 486 aaKnown RBP21.28■■□□□ 1
TPM1-226ENST00000560959 FAM49AQ9H0Q0 323 aaPredicted RBP21.28■■□□□ 1
TPM1-226ENST00000560959 LRFN2Q9ULH4 789 aa21.28■■□□□ 1
TPM1-226ENST00000560959 SMIM35A0A1B0GVV1 85 aa21.27■■□□□ 1
TPM1-226ENST00000560959 SARSP49591 514 aaKnown RBP21.27■■□□□ 1
TPM1-226ENST00000560959 IGBP1P78318 339 aa21.27■■□□□ 1
TPM1-226ENST00000560959 PAN2Q504Q3 1202 aaKnown RBP21.27■■□□□ 1
TPM1-226ENST00000560959 PLPPR4Q7Z2D5 763 aa21.27■■□□□ 1
TPM1-226ENST00000560959 RALYLQ86SE5 291 aaKnown RBP21.27■■□□□ 1
TPM1-226ENST00000560959 MICAL1Q8TDZ2 1067 aa21.27■■□□□ 1
TPM1-226ENST00000560959 RPGRIP1Q96KN7 1286 aa21.27■■□□□ 1
TPM1-226ENST00000560959 NEK1Q96PY6 1258 aa21.27■■□□□ 1
TPM1-226ENST00000560959 PCYT2Q99447 389 aa21.27■■□□□ 1
TPM1-226ENST00000560959 IL25Q9H293 177 aa21.27■■□□□ 1
TPM1-226ENST00000560959 AZI2Q9H6S1 392 aa21.27■■□□□ 1
TPM1-226ENST00000560959 PSTPIP2Q9H939 334 aa21.27■■□□□ 1
TPM1-226ENST00000560959 JADE2Q9NQC1 790 aa21.27■■□□□ 1
TPM1-226ENST00000560959 TLR9Q9NR96 1032 aa21.27■■□□□ 1
TPM1-226ENST00000560959 SEC63Q9UGP8 760 aaKnown RBP21.27■■□□□ 1
TPM1-226ENST00000560959 PCDHB7Q9Y5E2 793 aa21.27■■□□□ 1
TPM1-226ENST00000560959 GNAQP50148 359 aa21.26■□□□□ 0.99
TPM1-226ENST00000560959 FOXK2Q01167 660 aa21.26■□□□□ 0.99
TPM1-226ENST00000560959 DUSP6Q16828 381 aa21.26■□□□□ 0.99
TPM1-226ENST00000560959 CTCFLQ8NI51 663 aaPredicted RBP21.26■□□□□ 0.99
TPM1-226ENST00000560959 RASGRP4Q8TDF6 673 aa21.26■□□□□ 0.99
TPM1-226ENST00000560959 PIBF1Q8WXW3 757 aa21.26■□□□□ 0.99
TPM1-226ENST00000560959 TMX1Q9H3N1 280 aa21.26■□□□□ 0.99
TPM1-226ENST00000560959 ZDBF2Q9HCK1 2354 aa21.26■□□□□ 0.99
TPM1-226ENST00000560959 DOCK5Q9H7D0 1870 aa21.26■□□□□ 0.99
TPM1-226ENST00000560959 CFAP54Q96N23 3096 aa21.25■□□□□ 0.99
TPM1-226ENST00000560959 GFRA3O60609 400 aa21.25■□□□□ 0.99
TPM1-226ENST00000560959 DDAH1O94760 285 aa21.25■□□□□ 0.99
TPM1-226ENST00000560959 PTPN21Q16825 1174 aa21.25■□□□□ 0.99
TPM1-226ENST00000560959 ODR4Q5SWX8 454 aa21.25■□□□□ 0.99
TPM1-226ENST00000560959 MTA3Q9BTC8 594 aa21.25■□□□□ 0.99
TPM1-226ENST00000560959 JPH1Q9HDC5 661 aaPredicted RBP21.25■□□□□ 0.99
TPM1-226ENST00000560959 C1orf112Q9NSG2 853 aa21.25■□□□□ 0.99
TPM1-226ENST00000560959 LZTS1Q9Y250 596 aa21.25■□□□□ 0.99
TPM1-226ENST00000560959 E7EWF7 191 aa21.24■□□□□ 0.99
TPM1-226ENST00000560959 FSCN2O14926 492 aa21.24■□□□□ 0.99
TPM1-226ENST00000560959 PPFIA3O75145 1194 aa21.24■□□□□ 0.99
TPM1-226ENST00000560959 FGF18O76093 207 aa21.24■□□□□ 0.99
TPM1-226ENST00000560959 SRGAP2BP0DMP2 458 aa21.24■□□□□ 0.99
TPM1-226ENST00000560959 KRT76Q01546 638 aa21.24■□□□□ 0.99
TPM1-226ENST00000560959 KCNC3Q14003 757 aa21.24■□□□□ 0.99
TPM1-226ENST00000560959 S1PR5Q9H228 398 aa21.24■□□□□ 0.99
TPM1-226ENST00000560959 SLC9A2Q9UBY0 812 aa21.24■□□□□ 0.99
TPM1-226ENST00000560959 PROB1E7EW31 1015 aa21.23■□□□□ 0.99
TPM1-226ENST00000560959 PER2O15055 1255 aa21.23■□□□□ 0.99
TPM1-226ENST00000560959 SLC26A2P50443 739 aa21.23■□□□□ 0.99
TPM1-226ENST00000560959 VCPP55072 806 aaKnown RBP21.23■□□□□ 0.99
TPM1-226ENST00000560959 PLCB4Q15147 1175 aa21.23■□□□□ 0.99
TPM1-226ENST00000560959 SLC24A5Q71RS6 500 aa21.23■□□□□ 0.99
TPM1-226ENST00000560959 TEX2Q8IWB9 1127 aa21.23■□□□□ 0.99
TPM1-226ENST00000560959 VN1R2Q8NFZ6 395 aa21.23■□□□□ 0.99
TPM1-226ENST00000560959 ATOH1Q92858 354 aaPredicted RBP21.23■□□□□ 0.99
TPM1-226ENST00000560959 ZBTB10Q96DT7 871 aa21.23■□□□□ 0.99
TPM1-226ENST00000560959 RGS18Q9NS28 235 aa21.23■□□□□ 0.99
TPM1-226ENST00000560959 TRPC6Q9Y210 931 aa21.23■□□□□ 0.99
TPM1-226ENST00000560959 PCDHGC5Q9Y5F6 944 aa21.23■□□□□ 0.99
TPM1-226ENST00000560959 NFASCO94856 1347 aa21.23■□□□□ 0.99
TPM1-226ENST00000560959 CACNA1HO95180 2353 aa21.23■□□□□ 0.99
TPM1-226ENST00000560959 SPDYE3A6NKU9 549 aa21.22■□□□□ 0.99
TPM1-226ENST00000560959 IGHDP01880 384 aa21.22■□□□□ 0.99
TPM1-226ENST00000560959 HOXB8P17481 243 aaPredicted RBP21.22■□□□□ 0.99
TPM1-226ENST00000560959 GATMP50440 423 aa21.22■□□□□ 0.99
TPM1-226ENST00000560959 STAT5BP51692 787 aa21.22■□□□□ 0.99
TPM1-226ENST00000560959 ERVFC1P60507 584 aa21.22■□□□□ 0.99
TPM1-226ENST00000560959 TMEM62Q0P6H9 643 aa21.22■□□□□ 0.99
TPM1-226ENST00000560959 MTHFD1LQ6UB35 978 aa21.22■□□□□ 0.99
TPM1-226ENST00000560959 ZNF654Q8IZM8 581 aa21.22■□□□□ 0.99
TPM1-226ENST00000560959 TMTC2Q8N394 836 aa21.22■□□□□ 0.99
TPM1-226ENST00000560959 RUFY2Q8WXA3 655 aa21.22■□□□□ 0.99
TPM1-226ENST00000560959 RIPOR3Q96MK2 946 aa21.22■□□□□ 0.99
TPM1-226ENST00000560959 ERVK-5Q9HDB9 667 aa21.22■□□□□ 0.99
TPM1-226ENST00000560959 ATG7O95352 703 aa21.21■□□□□ 0.99
TPM1-226ENST00000560959 ANTXR2P58335 489 aa21.21■□□□□ 0.99
TPM1-226ENST00000560959 PLCB3Q01970 1234 aa21.21■□□□□ 0.99
TPM1-226ENST00000560959 NFX1Q12986 1120 aaKnown RBP21.21■□□□□ 0.99
TPM1-226ENST00000560959 SPOUT1Q5T280 376 aaKnown RBP21.21■□□□□ 0.99
TPM1-226ENST00000560959 ANKRD54Q6NXT1 300 aa21.21■□□□□ 0.99
TPM1-226ENST00000560959 SRBD1Q8N5C6 995 aaKnown RBP21.21■□□□□ 0.99
TPM1-226ENST00000560959 ELAC1Q9H777 363 aaKnown RBP21.21■□□□□ 0.99
TPM1-226ENST00000560959 LY9Q9HBG7 655 aa21.21■□□□□ 0.99
TPM1-226ENST00000560959 KCNH7Q9NS40 1196 aa21.21■□□□□ 0.99
TPM1-226ENST00000560959 TMEM260Q9NX78 707 aa21.21■□□□□ 0.99
TPM1-226ENST00000560959 PUF60Q9UHX1 559 aaKnown RBP21.21■□□□□ 0.99
TPM1-226ENST00000560959 PCDHA6Q9UN73 950 aa21.21■□□□□ 0.99
TPM1-226ENST00000560959 PCDHA8Q9Y5H6 950 aa21.21■□□□□ 0.99
TPM1-226ENST00000560959 TBKBP1A7MCY6 615 aa21.2■□□□□ 0.98
TPM1-226ENST00000560959 C9IYK1 514 aa21.2■□□□□ 0.98
TPM1-226ENST00000560959 GPR182O15218 404 aa21.2■□□□□ 0.98
TPM1-226ENST00000560959 RPS6KA5O75582 802 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms