RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 TIMP1P01033 207 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 ATP4AP20648 1035 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 PPFIA1Q13136 1202 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 BFSP2Q13515 415 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 FAM47CQ5HY64 1035 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 GDF6Q6KF10 455 aaPredicted RBP12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 DTHD1Q6ZMT9 781 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 SERINC5Q86VE9 423 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 TRIM50Q86XT4 487 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 ERMNQ8TAM6 284 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 AK8Q96MA6 479 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 ZNF396Q96N95 335 aaPredicted RBP12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 POLR3CQ9BUI4 534 aaPredicted RBP12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 ZSWIM4Q9H7M6 989 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 TUFT1Q9NNX1 390 aa12.51□□□□□ -0.41
SNRPCP18-201ENST00000560619 MKI67P46013 3256 aaKnown RBP12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 EML1O00423 815 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 CHMP2AO43633 222 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 ZNF862O60290 1169 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 SLITRK3O94933 977 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 OATP04181 439 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 INSRRP14616 1297 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 RPA1P27694 616 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 KRT85P78386 507 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 DNM1Q05193 864 aaKnown RBP12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 GRIK4Q16099 956 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 HAUS3Q68CZ6 603 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 FAM173BQ6P4H8 233 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 OTUD6AQ7L8S5 288 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 C7orf61Q8IZ16 206 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 NME8Q8N427 588 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 LMBR1Q8WVP7 490 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 GJA10Q969M2 543 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 CTAGE1Q96RT6 745 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 EIF2AK1Q9BQI3 630 aaKnown RBP12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 TRPV6Q9H1D0 765 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 TRMT13Q9NUP7 481 aaKnown RBP12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 TRPC6Q9Y210 931 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 NOD1Q9Y239 953 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 PCDHA2Q9Y5H9 948 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 CEP290O15078 2479 aa12.5□□□□□ -0.41
SNRPCP18-201ENST00000560619 SMIM35A0A1B0GVV1 85 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 TRIM43BA6NCK2 446 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 STBD1O95210 358 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 RAG1P15918 1043 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 BMP8BP34820 402 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 RFC2P35250 354 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 TECP42680 631 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 NASPP49321 788 aaPredicted RBP12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 CDC42EP1Q00587 391 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 SF3A1Q15459 793 aaKnown RBP12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 TARBP2Q15633 366 aaKnown RBP12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 CSPP1Q1MSJ5 1256 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 MARCH8Q5T0T0 291 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 MFSD5Q6N075 450 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 CLEC17AQ6ZS10 378 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 RSPH3Q86UC2 560 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 TRIM43Q96BQ3 446 aaPredicted RBP12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 JPH2Q9BR39 696 aaPredicted RBP12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 NOC4LQ9BVI4 516 aaKnown RBP12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 ANKEF1Q9NU02 776 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 SETD4Q9NVD3 440 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 CFAP45Q9UL16 551 aa12.49□□□□□ -0.41
SNRPCP18-201ENST00000560619 ZBTB42B2RXF5 422 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 GAS2O43903 313 aaKnown RBP12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 PFKMP08237 780 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 MARK3P27448 753 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 LONP1P36776 959 aaKnown RBP12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 PRKCEQ02156 737 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 NBR1Q14596 966 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 SLC39A14Q15043 492 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 PTPAQ15257 358 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 TRIM71Q2Q1W2 868 aaKnown RBP12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 FAM26DQ5JW98 314 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 PRPF38BQ5VTL8 546 aaKnown RBP12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 NCAPH2Q6IBW4 605 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 CKAP2LQ8IYA6 745 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 TMEM199Q8N511 208 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 RETREG2Q8NC44 543 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 CHAMP1Q96JM3 812 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 UIMC1Q96RL1 719 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 LBHD1Q9BQE6 289 aaPredicted RBP12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 LXNQ9BS40 222 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 HIPK3Q9H422 1215 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 TFIP11Q9UBB9 837 aaKnown RBP12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 LRWD1Q9UFC0 647 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 TUBE1Q9UJT0 475 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 SQORQ9Y6N5 450 aa12.48□□□□□ -0.41
SNRPCP18-201ENST00000560619 LOXHD1Q8IVV2 1947 aa12.47□□□□□ -0.41
SNRPCP18-201ENST00000560619 LTBP2Q14767 1821 aa12.47□□□□□ -0.41
SNRPCP18-201ENST00000560619 IGKV6-21A0A0C4DH24 114 aa12.47□□□□□ -0.41
SNRPCP18-201ENST00000560619 A0A1W2PPC1 479 aa12.47□□□□□ -0.41
SNRPCP18-201ENST00000560619 POTEMA6NI47 508 aa12.47□□□□□ -0.41
SNRPCP18-201ENST00000560619 H0YGN5 161 aa12.47□□□□□ -0.41
SNRPCP18-201ENST00000560619 TREHO43280 583 aa12.47□□□□□ -0.41
SNRPCP18-201ENST00000560619 PPP6R2O75170 966 aa12.47□□□□□ -0.41
SNRPCP18-201ENST00000560619 YEATS4O95619 227 aa12.47□□□□□ -0.41
SNRPCP18-201ENST00000560619 SPATA31C1P0DKV0 1188 aa12.47□□□□□ -0.41
SNRPCP18-201ENST00000560619 TMOD1P28289 359 aa12.47□□□□□ -0.41
SNRPCP18-201ENST00000560619 YWHABP31946 246 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms