RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SAMD5Q5TGI4 173 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 SIX5Q8N196 739 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 REXO1Q8N1G1 1221 aaKnown RBP5.95□□□□□ -1.46
SPG11-220ENST00000559933 ZNF713Q8N859 430 aaPredicted RBP5.95□□□□□ -1.46
SPG11-220ENST00000559933 DAGLBQ8NCG7 672 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 TBCKQ8TEA7 893 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 ZDHHC1Q8WTX9 485 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 CUL5Q93034 780 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 FGD4Q96M96 766 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 TAAR1Q96RJ0 339 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 HINFPQ9BQA5 517 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 TSPAN10Q9H1Z9 355 aaPredicted RBP5.95□□□□□ -1.46
SPG11-220ENST00000559933 FOXP1Q9H334 677 aaPredicted RBP5.95□□□□□ -1.46
SPG11-220ENST00000559933 C6orf50Q9HD87 102 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 RIC8AQ9NPQ8 531 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 A1CFQ9NQ94 594 aaKnown RBP5.95□□□□□ -1.46
SPG11-220ENST00000559933 SH3GLB2Q9NR46 395 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 HOXC10Q9NYD6 342 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 KIF3AQ9Y496 699 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 PCDHB6Q9Y5E3 794 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 MAFBQ9Y5Q3 323 aaPredicted RBP5.95□□□□□ -1.46
SPG11-220ENST00000559933 TCHHQ07283 1943 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 MYPNQ86TC9 1320 aa5.95□□□□□ -1.46
SPG11-220ENST00000559933 CCDC194A0A1B0GVG4 234 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 SFI1A8K8P3 1242 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 SHISA8B8ZZ34 492 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 GCOM1H8Y6P7 765 aaPredicted RBP5.94□□□□□ -1.46
SPG11-220ENST00000559933 SORBS3O60504 671 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 GADD45BO75293 160 aaPredicted RBP5.94□□□□□ -1.46
SPG11-220ENST00000559933 POLR2MP0CAP2 368 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 MARCKSP29966 332 aaPredicted RBP5.94□□□□□ -1.46
SPG11-220ENST00000559933 MCM7P33993 719 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 HSD17B4P51659 736 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 RPS6P62753 249 aaKnown RBP5.94□□□□□ -1.46
SPG11-220ENST00000559933 GRIN1Q05586 938 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 SREBF2Q12772 1141 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 NOGQ13253 232 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 PABPC4Q13310 644 aaKnown RBP eCLIP5.94□□□□□ -1.46
SPG11-220ENST00000559933 NONOQ15233 471 aaKnown RBP eCLIP5.94□□□□□ -1.46
SPG11-220ENST00000559933 SAFBQ15424 915 aaKnown RBP eCLIP5.94□□□□□ -1.46
SPG11-220ENST00000559933 LETM2Q2VYF4 491 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 C1orf53Q5VUE5 145 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 RNF207Q6ZRF8 634 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 RIOX2Q8IUF8 465 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 TSEN2Q8NCE0 465 aaKnown RBP5.94□□□□□ -1.46
SPG11-220ENST00000559933 CYP2W1Q8TAV3 490 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 SYTL5Q8TDW5 730 aaPredicted RBP5.94□□□□□ -1.46
SPG11-220ENST00000559933 HHIPL1Q96JK4 782 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 PPP1R12CQ9BZL4 782 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 TMEM60Q9H2L4 133 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 ACAD9Q9H845 621 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 BRMS1Q9HCU9 246 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 AVENQ9NQS1 362 aaPredicted RBP5.94□□□□□ -1.46
SPG11-220ENST00000559933 CYP39A1Q9NYL5 469 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 SLC45A1Q9Y2W3 748 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 MRPL11Q9Y3B7 192 aaKnown RBP5.94□□□□□ -1.46
SPG11-220ENST00000559933 RABGAP1Q9Y3P9 1069 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 HTTP42858 3142 aa5.94□□□□□ -1.46
SPG11-220ENST00000559933 EML1O00423 815 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 ATP2A1O14983 1001 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 CCNT1O60563 726 aaKnown RBP5.93□□□□□ -1.46
SPG11-220ENST00000559933 TRPA1O75762 1119 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 EPXP11678 715 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 HSPA6P17066 643 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 GNA11P29992 359 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 TM4SF4P48230 202 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 OAZ1P54368 228 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 ARHGAP4P98171 946 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 PTPAQ15257 358 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 SF3A1Q15459 793 aaKnown RBP5.93□□□□□ -1.46
SPG11-220ENST00000559933 HIF1AQ16665 826 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 FAM110CQ1W6H9 321 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 TTC38Q5R3I4 469 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 C17orf99Q6UX52 265 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 KRT25Q7Z3Z0 450 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 GPR142Q7Z601 462 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 ANKRD35Q8N283 1001 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 MB21D1Q8N884 522 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 GPRC5AQ8NFJ5 357 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 CCDC12Q8WUD4 166 aaPredicted RBP5.93□□□□□ -1.46
SPG11-220ENST00000559933 CLIC6Q96NY7 704 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 MMP19Q99542 508 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 VRTNQ9H8Y1 702 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 RNF186Q9NXI6 227 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 RTEL1Q9NZ71 1219 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 MORF4L1Q9UBU8 362 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 HCN4Q9Y3Q4 1203 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 RPTORQ8N122 1335 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 MCM3APO60318 1980 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 CENPFP49454 3210 aa5.93□□□□□ -1.46
SPG11-220ENST00000559933 MGAMO43451 1857 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 DOCK5Q9H7D0 1870 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 PLXNA1Q9UIW2 1896 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 SPDYE3A6NKU9 549 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 FAM86B1E9PN63 330 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 RBAK-RBAKDNI3L0D1 243 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 CA12O43570 354 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 TLR2O60603 784 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 COBLO75128 1261 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 FAM86B2P0C5J1 330 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms