RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PDE11AQ9HCR9 933 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 PRDM4Q9UKN5 801 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 RRP15Q9Y3B9 282 aaKnown RBP11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 MORC2Q9Y6X9 1032 aaPredicted RBP11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 KLRG2A4D1S0 409 aaPredicted RBP11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 GOLGA6CA6NDK9 693 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 MANSC4A6NHS7 340 aaPredicted RBP11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 TACC1O75410 805 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 TRPA1O75762 1119 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 GOLGA6DP0CG33 693 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 ASIC2Q16515 512 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 THNSL1Q8IYQ7 743 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 NEK9Q8TD19 979 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 SPATC1LQ9H0A9 340 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 TMEM206Q9H813 350 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 ATP6V0A4Q9HBG4 840 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 GOLGA6AQ9NYA3 693 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 ASTN2O75129 1339 aaPredicted RBP11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 FCGRTP55899 365 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 TFAMQ00059 246 aaKnown RBP11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 KLHL30Q0D2K2 578 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 TUBB2AQ13885 445 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 SLC9C1Q4G0N8 1177 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 GNASQ5JWF2 1037 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 SPECC1LQ69YQ0 1117 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 PLEKHH3Q7Z736 793 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 FAM186BQ8IYM0 893 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 TCP11Q8WWU5 503 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 MXRA8Q9BRK3 442 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 TUBB2BQ9BVA1 445 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 ASCC2Q9H1I8 757 aaPredicted RBP11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 NMRK2Q9NPI5 230 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 LRFN2Q9ULH4 789 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 GDAQ9Y2T3 454 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 MARF1Q9Y4F3 1742 aaKnown RBP11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 ESYT2A0FGR8 921 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 P4HA1P13674 534 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 EZRP15311 586 aaKnown RBP11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 ZNF354CQ86Y25 554 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 RHPN2Q8IUC4 686 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 SMC1BQ8NDV3 1235 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 CLMNQ96JQ2 1002 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 CCDC114Q96M63 670 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 NOX5Q96PH1 765 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 LSM14BQ9BX40 385 aaKnown RBP11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 KCNF1Q9H3M0 494 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 GOLGA8IPA6NC78 632 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 GOLGA8JA6NMD2 632 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 ERCC5P28715 1186 aaPredicted RBP11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 DSG3P32926 999 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 TRIM14Q14142 442 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 CCDC121Q6ZUS5 278 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 SFR1Q86XK3 245 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 CNOT6LQ96LI5 555 aaKnown RBP11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 TUBGCP2Q9BSJ2 902 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 PLVAPQ9BX97 442 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 TMEM60Q9H2L4 133 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 MROH8Q9H579 483 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 RIOX1Q9H6W3 641 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 ST7Q9NRC1 585 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 KCNH7Q9NS40 1196 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 PSMC2P35998 433 aaKnown RBP11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 RNASELQ05823 741 aaKnown RBP11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 MAPK6Q16659 721 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 SHC4Q6S5L8 630 aa11.62□□□□□ -0.55
CARMIL3-202ENST00000559694 RGPD5Q99666 1765 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 SLC16A4O15374 487 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 ATP8B1O43520 1251 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 C1orf112Q9NSG2 853 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 CCNE1P24864 410 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 ACTN2P35609 894 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 VAV2P52735 878 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 PDIA5Q14554 519 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 LONRF2Q1L5Z9 754 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 CCDC144BQ3MJ40 725 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 EP400NLQ6ZTU2 488 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 RABGGTAQ92696 567 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 RAD54LQ92698 747 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 TMEM106CQ9BVX2 250 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 SCN11AQ9UI33 1791 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 VWA5AO00534 786 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 CSPG5O95196 566 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 GH1P01241 217 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 NEFHP12036 1026 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 STAT1P42224 750 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 PSMD2Q13200 908 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 DEFB115Q30KQ5 88 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 USP49Q70CQ1 688 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 ANKRD7Q92527 254 aa11.61□□□□□ -0.55
CARMIL3-202ENST00000559694 LPXNO60711 386 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 IRX5P78411 483 aaPredicted RBP11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 NTRK3Q16288 839 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 UNC13DQ70J99 1090 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 LMBR1Q8WVP7 490 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 IFT81Q8WYA0 676 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 USP27XA6NNY8 438 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 MAP2K2P36507 400 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 PRPHP41219 470 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms