RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 TPH2Q8IWU9 490 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 C7orf61Q8IZ16 206 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 LINC00301Q8NCQ3 95 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 ERMNQ8TAM6 284 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 NEK9Q8TD19 979 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 LMBR1Q8WVP7 490 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 DPF3Q92784 378 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 CIZ1Q9ULV3 898 aaPredicted RBP19.57■□□□□ 0.72
TPM1-214ENST00000558544 ATP6V1DQ9Y5K8 247 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 TANC1Q9C0D5 1861 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 LTBP2Q14767 1821 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 DCDC2CA8MYV0 355 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 TLR3O15455 904 aaKnown RBP19.56■□□□□ 0.72
TPM1-214ENST00000558544 HBP1O60381 514 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 EVI5O60447 810 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 MED24O75448 989 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 SLITRK3O94933 977 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 YEATS4O95619 227 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 CDC25AP30304 524 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 ZNF200P98182 395 aaPredicted RBP19.56■□□□□ 0.72
TPM1-214ENST00000558544 GRIK4Q16099 956 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 PTGISQ16647 500 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 ATL3Q6DD88 541 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 TRAPPC12Q8WVT3 735 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 BBXQ8WY36 941 aaPredicted RBP19.56■□□□□ 0.72
TPM1-214ENST00000558544 FAM167AQ96KS9 214 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 TOX2Q96NM4 488 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 HSD17B14Q9BPX1 270 aa19.56■□□□□ 0.72
TPM1-214ENST00000558544 SEPT9Q9UHD8 586 aaPredicted RBP19.56■□□□□ 0.72
TPM1-214ENST00000558544 FBXO2Q9UK22 296 aaPredicted RBP19.56■□□□□ 0.72
TPM1-214ENST00000558544 NRCAMQ92823 1304 aa19.55■□□□□ 0.72
TPM1-214ENST00000558544 TMEM150BA6NC51 233 aa19.55■□□□□ 0.72
TPM1-214ENST00000558544 SPTLC2O15270 562 aa19.55■□□□□ 0.72
TPM1-214ENST00000558544 DKC1O60832 514 aaKnown RBP eCLIP19.55■□□□□ 0.72
TPM1-214ENST00000558544 CD4P01730 458 aa19.55■□□□□ 0.72
TPM1-214ENST00000558544 NCLP19338 710 aaKnown RBP19.55■□□□□ 0.72
TPM1-214ENST00000558544 HOXC8P31273 242 aa19.55■□□□□ 0.72
TPM1-214ENST00000558544 FAAP100Q0VG06 881 aa19.55■□□□□ 0.72
TPM1-214ENST00000558544 HAUS3Q68CZ6 603 aa19.55■□□□□ 0.72
TPM1-214ENST00000558544 SNX29Q8TEQ0 813 aa19.55■□□□□ 0.72
TPM1-214ENST00000558544 TNPO1Q92973 898 aaKnown RBP19.55■□□□□ 0.72
TPM1-214ENST00000558544 ZSWIM4Q9H7M6 989 aa19.55■□□□□ 0.72
TPM1-214ENST00000558544 CFAP45Q9UL16 551 aa19.55■□□□□ 0.72
TPM1-214ENST00000558544 NOD1Q9Y239 953 aa19.55■□□□□ 0.72
TPM1-214ENST00000558544 TREHO43280 583 aa19.54■□□□□ 0.72
TPM1-214ENST00000558544 STBD1O95210 358 aa19.54■□□□□ 0.72
TPM1-214ENST00000558544 CLTBP09497 229 aa19.54■□□□□ 0.72
TPM1-214ENST00000558544 SPATA31C1P0DKV0 1188 aa19.54■□□□□ 0.72
TPM1-214ENST00000558544 CCT6AP40227 531 aaKnown RBP19.54■□□□□ 0.72
TPM1-214ENST00000558544 KRT85P78386 507 aa19.54■□□□□ 0.72
TPM1-214ENST00000558544 XKR3Q5GH77 459 aa19.54■□□□□ 0.72
TPM1-214ENST00000558544 CATSPER3Q86XQ3 398 aa19.54■□□□□ 0.72
TPM1-214ENST00000558544 C4orf19Q8IY42 314 aa19.54■□□□□ 0.72
TPM1-214ENST00000558544 CLIC6Q96NY7 704 aa19.54■□□□□ 0.72
TPM1-214ENST00000558544 POLR3CQ9BUI4 534 aaPredicted RBP19.54■□□□□ 0.72
TPM1-214ENST00000558544 TUFT1Q9NNX1 390 aa19.54■□□□□ 0.72
TPM1-214ENST00000558544 PRDM5Q9NQX1 630 aaPredicted RBP19.54■□□□□ 0.72
TPM1-214ENST00000558544 PDLIM7Q9NR12 457 aa19.54■□□□□ 0.72
TPM1-214ENST00000558544 NRBP2Q9NSY0 501 aa19.54■□□□□ 0.72
TPM1-214ENST00000558544 SRPRBQ9Y5M8 271 aaKnown RBP19.54■□□□□ 0.72
TPM1-214ENST00000558544 MORC2Q9Y6X9 1032 aaPredicted RBP19.54■□□□□ 0.72
TPM1-214ENST00000558544 COL1A2P08123 1366 aa19.54■□□□□ 0.72
TPM1-214ENST00000558544 DDX11L8A8MPP1 907 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 ZBTB42B2RXF5 422 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 GNAT1P11488 350 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 CYP2C9P11712 490 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 RPA1P27694 616 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 LONP1P36776 959 aaKnown RBP19.53■□□□□ 0.72
TPM1-214ENST00000558544 ZNF484Q5JVG2 852 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 KRT79Q5XKE5 535 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 PLA2G4FQ68DD2 849 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 POTEGQ6S5H5 508 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 KRI1Q8N9T8 703 aaKnown RBP19.53■□□□□ 0.72
TPM1-214ENST00000558544 ZBTB10Q96DT7 871 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 AK8Q96MA6 479 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 CTAGE1Q96RT6 745 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 SH2D3AQ9BRG2 576 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 CSRNP2Q9H175 543 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 CHMP5Q9NZZ3 219 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 PCDH10Q9P2E7 1040 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 TUBE1Q9UJT0 475 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 STK24Q9Y6E0 443 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 SIP14410 1827 aa19.53■□□□□ 0.72
TPM1-214ENST00000558544 PDE4DIPQ5VU43 2346 aa19.52■□□□□ 0.72
TPM1-214ENST00000558544 RRN3P2A6NIE6 340 aa19.52■□□□□ 0.72
TPM1-214ENST00000558544 ZBTB39O15060 712 aa19.52■□□□□ 0.72
TPM1-214ENST00000558544 PPP6R2O75170 966 aa19.52■□□□□ 0.72
TPM1-214ENST00000558544 YWHABP31946 246 aaKnown RBP19.52■□□□□ 0.72
TPM1-214ENST00000558544 ADAM17P78536 824 aa19.52■□□□□ 0.72
TPM1-214ENST00000558544 MLLT1Q03111 559 aaPredicted RBP19.52■□□□□ 0.72
TPM1-214ENST00000558544 ECM1Q16610 540 aa19.52■□□□□ 0.72
TPM1-214ENST00000558544 MTERF2Q49AM1 385 aa19.52■□□□□ 0.72
TPM1-214ENST00000558544 SPECC1Q5M775 1068 aa19.52■□□□□ 0.72
TPM1-214ENST00000558544 MARCH8Q5T0T0 291 aa19.52■□□□□ 0.72
TPM1-214ENST00000558544 ANO5Q75V66 913 aa19.52■□□□□ 0.72
TPM1-214ENST00000558544 SH3RF1Q7Z6J0 888 aa19.52■□□□□ 0.72
TPM1-214ENST00000558544 MMTAG2Q9BU76 263 aaKnown RBP19.52■□□□□ 0.72
TPM1-214ENST00000558544 TMEM39AQ9NV64 488 aa19.52■□□□□ 0.72
TPM1-214ENST00000558544 SCN5AQ14524 2016 aa19.52■□□□□ 0.72
TPM1-214ENST00000558544 A0A087WWV3 80 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms