RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 VAV3Q9UKW4 847 aa13.52□□□□□ -0.25
ACTN1-214ENST00000555075 GRIN2DO15399 1336 aa13.52□□□□□ -0.25
ACTN1-214ENST00000555075 IGKV6D-21A0A0A0MT36 114 aa13.51□□□□□ -0.25
ACTN1-214ENST00000555075 WNT7AO00755 349 aa13.51□□□□□ -0.25
ACTN1-214ENST00000555075 F13A1P00488 732 aa13.51□□□□□ -0.25
ACTN1-214ENST00000555075 CCT6AP40227 531 aaKnown RBP13.51□□□□□ -0.25
ACTN1-214ENST00000555075 PRPHP41219 470 aa13.51□□□□□ -0.25
ACTN1-214ENST00000555075 TOB1P50616 345 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-214ENST00000555075 PTK7Q13308 1070 aa13.51□□□□□ -0.25
ACTN1-214ENST00000555075 CAGE1Q8TC20 777 aa13.51□□□□□ -0.25
ACTN1-214ENST00000555075 LMBR1Q8WVP7 490 aa13.51□□□□□ -0.25
ACTN1-214ENST00000555075 DYDC2Q96IM9 177 aa13.51□□□□□ -0.25
ACTN1-214ENST00000555075 MTMR9Q96QG7 549 aa13.51□□□□□ -0.25
ACTN1-214ENST00000555075 PCYT2Q99447 389 aa13.51□□□□□ -0.25
ACTN1-214ENST00000555075 EIF2AK1Q9BQI3 630 aaKnown RBP13.51□□□□□ -0.25
ACTN1-214ENST00000555075 LXNQ9BS40 222 aa13.51□□□□□ -0.25
ACTN1-214ENST00000555075 MAFBQ9Y5Q3 323 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-214ENST00000555075 COL1A2P08123 1366 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 IGSF9BQ9UPX0 1349 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 VWA3AA6NCI4 1184 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 POTEMA6NI47 508 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 EML1O00423 815 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 TIMP1P01033 207 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 RPLP2P05387 115 aaKnown RBP13.5□□□□□ -0.25
ACTN1-214ENST00000555075 TMOD1P28289 359 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 TXLNAP40222 546 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 THPOP40225 353 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 NUCB2P80303 420 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 ZNF200P98182 395 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-214ENST00000555075 ATP2C1P98194 919 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-214ENST00000555075 TBC1D8BQ0IIM8 1120 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 CTTNQ14247 550 aaKnown RBP13.5□□□□□ -0.25
ACTN1-214ENST00000555075 MTERF2Q49AM1 385 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 ARL6IP4Q66PJ3 421 aaKnown RBP13.5□□□□□ -0.25
ACTN1-214ENST00000555075 TAF2Q6P1X5 1199 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 EXOC8Q8IYI6 725 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 METTL13Q8N6R0 699 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 SNX29Q8TEQ0 813 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 SCLT1Q96NL6 688 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 MAP7D2Q96T17 732 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 JPH2Q9BR39 696 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-214ENST00000555075 FAM49AQ9H0Q0 323 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-214ENST00000555075 PRO3102Q9H379 93 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 RGL1Q9NZL6 768 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 PCDH10Q9P2E7 1040 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 CFAP45Q9UL16 551 aa13.5□□□□□ -0.25
ACTN1-214ENST00000555075 KIAA0355O15063 1070 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 MAGEB2O15479 319 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 TREHO43280 583 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 CD4P01730 458 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 CYP2C18P33260 490 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 UBA7P41226 1012 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 DNM2P50570 870 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 FXR2P51116 673 aaKnown RBP eCLIP13.49□□□□□ -0.251e-6■■■■□ 19.9
ACTN1-214ENST00000555075 CCL23P55773 120 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 MDM2Q00987 491 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-214ENST00000555075 FPGSQ05932 587 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 PPIGQ13427 754 aaKnown RBP eCLIP13.49□□□□□ -0.25
ACTN1-214ENST00000555075 PDIA5Q14554 519 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 FAM173BQ6P4H8 233 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 SH3RF1Q7Z6J0 888 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 BADQ92934 168 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 CALML4Q96GE6 196 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 CEP170P1Q96L14 293 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 FTOQ9C0B1 505 aaKnown RBP eCLIP13.49□□□□□ -0.25
ACTN1-214ENST00000555075 SUGCTQ9HAC7 445 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 TUFT1Q9NNX1 390 aa13.49□□□□□ -0.25
ACTN1-214ENST00000555075 DOCK5Q9H7D0 1870 aa13.48□□□□□ -0.25
ACTN1-214ENST00000555075 TRIM43BA6NCK2 446 aa13.48□□□□□ -0.25
ACTN1-214ENST00000555075 SELPP16109 830 aa13.48□□□□□ -0.25
ACTN1-214ENST00000555075 KLRC1P26715 233 aa13.48□□□□□ -0.25
ACTN1-214ENST00000555075 YWHABP31946 246 aaKnown RBP13.48□□□□□ -0.25
ACTN1-214ENST00000555075 POLGP54098 1239 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-214ENST00000555075 UGCGQ16739 394 aa13.48□□□□□ -0.25
ACTN1-214ENST00000555075 XKR9Q5GH70 373 aa13.48□□□□□ -0.25
ACTN1-214ENST00000555075 ATL3Q6DD88 541 aa13.48□□□□□ -0.25
ACTN1-214ENST00000555075 MTHFD1LQ6UB35 978 aa13.48□□□□□ -0.25
ACTN1-214ENST00000555075 RPUSD2Q8IZ73 545 aaKnown RBP13.48□□□□□ -0.25
ACTN1-214ENST00000555075 TRAPPC12Q8WVT3 735 aa13.48□□□□□ -0.25
ACTN1-214ENST00000555075 SLC7A3Q8WY07 619 aa13.48□□□□□ -0.25
ACTN1-214ENST00000555075 TRIM43Q96BQ3 446 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-214ENST00000555075 NACC1Q96RE7 527 aa13.48□□□□□ -0.25
ACTN1-214ENST00000555075 NOC4LQ9BVI4 516 aaKnown RBP13.48□□□□□ -0.25
ACTN1-214ENST00000555075 UBE2OQ9C0C9 1292 aaKnown RBP13.48□□□□□ -0.25
ACTN1-214ENST00000555075 TBX21Q9UL17 535 aa13.48□□□□□ -0.25
ACTN1-214ENST00000555075 CLIC4Q9Y696 253 aa13.48□□□□□ -0.25
ACTN1-214ENST00000555075 KDM3AQ9Y4C1 1321 aa13.47□□□□□ -0.25
ACTN1-214ENST00000555075 RSPH10B2B2RC85 870 aa13.47□□□□□ -0.25
ACTN1-214ENST00000555075 PITPNM1O00562 1244 aa13.47□□□□□ -0.25
ACTN1-214ENST00000555075 PARNO95453 639 aaKnown RBP13.47□□□□□ -0.25
ACTN1-214ENST00000555075 CTSHP09668 335 aa13.47□□□□□ -0.25
ACTN1-214ENST00000555075 RSPH10BP0C881 870 aa13.47□□□□□ -0.25
ACTN1-214ENST00000555075 MARCKSP29966 332 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-214ENST00000555075 LONP1P36776 959 aaKnown RBP13.47□□□□□ -0.25
ACTN1-214ENST00000555075 KRT85P78386 507 aa13.47□□□□□ -0.25
ACTN1-214ENST00000555075 IER5Q5VY09 327 aa13.47□□□□□ -0.25
ACTN1-214ENST00000555075 MFSD5Q6N075 450 aa13.47□□□□□ -0.25
ACTN1-214ENST00000555075 B3GNT9Q6UX72 402 aa13.47□□□□□ -0.25
ACTN1-214ENST00000555075 LRRC8DQ7L1W4 858 aa13.47□□□□□ -0.25
ACTN1-214ENST00000555075 SERINC5Q86VE9 423 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms