RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 LOXHD1Q8IVV2 1947 aa26.67■■□□□ 1.86
TDP1-205ENST00000553527 BAIAP3O94812 1187 aa26.66■■□□□ 1.86
TDP1-205ENST00000553527 IKBKEQ14164 716 aa26.66■■□□□ 1.86
TDP1-205ENST00000553527 RAB30Q15771 203 aa26.66■■□□□ 1.86
TDP1-205ENST00000553527 EARS2Q5JPH6 523 aaKnown RBP26.66■■□□□ 1.86
TDP1-205ENST00000553527 NEK8Q86SG6 692 aa26.66■■□□□ 1.86
TDP1-205ENST00000553527 RSPH3Q86UC2 560 aa26.66■■□□□ 1.86
TDP1-205ENST00000553527 DBF4BQ8NFT6 615 aa26.66■■□□□ 1.86
TDP1-205ENST00000553527 TMX3Q96JJ7 454 aa26.66■■□□□ 1.86
TDP1-205ENST00000553527 RIT2Q99578 217 aa26.66■■□□□ 1.86
TDP1-205ENST00000553527 DISC1Q9NRI5 854 aa26.66■■□□□ 1.86
TDP1-205ENST00000553527 YBX2Q9Y2T7 364 aaKnown RBP26.66■■□□□ 1.86
TDP1-205ENST00000553527 PTPRSQ13332 1948 aa26.65■■□□□ 1.86
TDP1-205ENST00000553527 MBLAC1A4D2B0 266 aaPredicted RBP26.65■■□□□ 1.86
TDP1-205ENST00000553527 FAM205CA6NFA0 338 aa26.65■■□□□ 1.86
TDP1-205ENST00000553527 HBP1O60381 514 aa26.65■■□□□ 1.86
TDP1-205ENST00000553527 CCNT1O60563 726 aaKnown RBP26.65■■□□□ 1.86
TDP1-205ENST00000553527 CAND2O75155 1236 aa26.65■■□□□ 1.86
TDP1-205ENST00000553527 ATP4AP20648 1035 aa26.65■■□□□ 1.86
TDP1-205ENST00000553527 GUCY1B3Q02153 619 aa26.65■■□□□ 1.86
TDP1-205ENST00000553527 KRT40Q6A162 431 aa26.65■■□□□ 1.86
TDP1-205ENST00000553527 TMCO2Q7Z6W1 182 aaPredicted RBP26.65■■□□□ 1.86
TDP1-205ENST00000553527 ATP8B4Q8TF62 1192 aa26.65■■□□□ 1.86
TDP1-205ENST00000553527 SLC9A7Q96T83 725 aa26.65■■□□□ 1.86
TDP1-205ENST00000553527 CDX2Q99626 313 aaPredicted RBP26.65■■□□□ 1.86
TDP1-205ENST00000553527 UNC45AQ9H3U1 944 aa26.65■■□□□ 1.86
TDP1-205ENST00000553527 COL6A3P12111 3177 aa26.64■■□□□ 1.86
TDP1-205ENST00000553527 WDR64B1ANS9 1081 aa26.64■■□□□ 1.86
TDP1-205ENST00000553527 BTBD18B2RXH4 712 aa26.64■■□□□ 1.86
TDP1-205ENST00000553527 SLC37A4O43826 429 aa26.64■■□□□ 1.86
TDP1-205ENST00000553527 CHRNA1P02708 482 aa26.64■■□□□ 1.86
TDP1-205ENST00000553527 WDR5P61964 334 aaKnown RBP26.64■■□□□ 1.86
TDP1-205ENST00000553527 TMEM62Q0P6H9 643 aa26.64■■□□□ 1.86
TDP1-205ENST00000553527 SLC28A3Q9HAS3 691 aa26.64■■□□□ 1.86
TDP1-205ENST00000553527 ABHD14A-ACY1A0A1B0GW23 586 aa26.63■■□□□ 1.85
TDP1-205ENST00000553527 PSMD10O75832 226 aa26.63■■□□□ 1.85
TDP1-205ENST00000553527 MMP1P03956 469 aa26.63■■□□□ 1.85
TDP1-205ENST00000553527 KLRC1P26715 233 aa26.63■■□□□ 1.85
TDP1-205ENST00000553527 DEFB103AP81534 67 aa26.63■■□□□ 1.85
TDP1-205ENST00000553527 GRIN2CQ14957 1233 aa26.63■■□□□ 1.85
TDP1-205ENST00000553527 MTHFD1LQ6UB35 978 aa26.63■■□□□ 1.85
TDP1-205ENST00000553527 MOXD1Q6UVY6 613 aa26.63■■□□□ 1.85
TDP1-205ENST00000553527 MYLIPQ8WY64 445 aa26.63■■□□□ 1.85
TDP1-205ENST00000553527 MAFBQ9Y5Q3 323 aaPredicted RBP26.63■■□□□ 1.85
TDP1-205ENST00000553527 MICAL3Q7RTP6 2002 aa26.63■■□□□ 1.85
TDP1-205ENST00000553527 MARCH6O60337 910 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 PLEKHG4Q58EX7 1191 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 FAM26DQ5JW98 314 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 MIER3Q7Z3K6 550 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 HERC6Q8IVU3 1022 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 HSCBQ8IWL3 235 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 DIS3L2Q8IYB7 885 aaKnown RBP26.62■■□□□ 1.85
TDP1-205ENST00000553527 ETNPPLQ8TBG4 499 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 PHOSPHO2Q8TCD6 241 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 SEPT8Q92599 483 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 SNX21Q969T3 373 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 MBOAT7Q96N66 472 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 LLPHQ9BRT6 129 aaKnown RBP26.62■■□□□ 1.85
TDP1-205ENST00000553527 PCDHA2Q9Y5H9 948 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 PCDHA11Q9Y5I1 949 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 CDY2AQ9Y6F7 541 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 CDH23Q9H251 3354 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 SIP14410 1827 aa26.62■■□□□ 1.85
TDP1-205ENST00000553527 TMEM265A0A087WTH1 108 aa26.61■■□□□ 1.85
TDP1-205ENST00000553527 GHRP10912 638 aa26.61■■□□□ 1.85
TDP1-205ENST00000553527 FAM117BQ6P1L5 589 aa26.61■■□□□ 1.85
TDP1-205ENST00000553527 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.61■■□□□ 1.85
TDP1-205ENST00000553527 BBXQ8WY36 941 aaPredicted RBP26.61■■□□□ 1.85
TDP1-205ENST00000553527 ZBED2Q9BTP6 218 aa26.61■■□□□ 1.85
TDP1-205ENST00000553527 STXBP5LQ9Y2K9 1186 aa26.61■■□□□ 1.85
TDP1-205ENST00000553527 KIF28PB7ZC32 967 aa26.6■■□□□ 1.85
TDP1-205ENST00000553527 K7ELQ4 463 aaPredicted RBP26.6■■□□□ 1.85
TDP1-205ENST00000553527 SFNP31947 248 aa26.6■■□□□ 1.85
TDP1-205ENST00000553527 JAK3P52333 1124 aa26.6■■□□□ 1.85
TDP1-205ENST00000553527 ZNF484Q5JVG2 852 aa26.6■■□□□ 1.85
TDP1-205ENST00000553527 PPP4R3AQ6IN85 833 aa26.6■■□□□ 1.85
TDP1-205ENST00000553527 RPAINQ86UA6 219 aa26.6■■□□□ 1.85
TDP1-205ENST00000553527 FAM184AQ8NB25 1140 aa26.6■■□□□ 1.85
TDP1-205ENST00000553527 TNFRSF25Q93038 417 aa26.6■■□□□ 1.85
TDP1-205ENST00000553527 C8orf76Q96K31 380 aa26.6■■□□□ 1.85
TDP1-205ENST00000553527 GCFC2P16383 781 aaKnown RBP26.59■■□□□ 1.85
TDP1-205ENST00000553527 MRPS6P82932 125 aaKnown RBP26.59■■□□□ 1.85
TDP1-205ENST00000553527 MGAT3Q09327 533 aa26.59■■□□□ 1.85
TDP1-205ENST00000553527 UGCGQ16739 394 aa26.59■■□□□ 1.85
TDP1-205ENST00000553527 IER5Q5VY09 327 aa26.59■■□□□ 1.85
TDP1-205ENST00000553527 PPP2R2DQ66LE6 453 aa26.59■■□□□ 1.85
TDP1-205ENST00000553527 IFIH1Q9BYX4 1025 aaKnown RBP26.59■■□□□ 1.85
TDP1-205ENST00000553527 SMIM35A0A1B0GVV1 85 aa26.58■■□□□ 1.85
TDP1-205ENST00000553527 M0QZ92 97 aa26.58■■□□□ 1.85
TDP1-205ENST00000553527 TLL1O43897 1013 aa26.58■■□□□ 1.85
TDP1-205ENST00000553527 EFCAB14O75071 495 aa26.58■■□□□ 1.85
TDP1-205ENST00000553527 CA3P07451 260 aa26.58■■□□□ 1.85
TDP1-205ENST00000553527 SAFBQ15424 915 aaKnown RBP eCLIP26.58■■□□□ 1.85
TDP1-205ENST00000553527 POTEDQ86YR6 584 aa26.58■■□□□ 1.85
TDP1-205ENST00000553527 METTL13Q8N6R0 699 aa26.58■■□□□ 1.85
TDP1-205ENST00000553527 NAP1L4Q99733 375 aaKnown RBP26.58■■□□□ 1.85
TDP1-205ENST00000553527 NRBP2Q9NSY0 501 aa26.58■■□□□ 1.85
TDP1-205ENST00000553527 GINS2Q9Y248 185 aa26.58■■□□□ 1.85
TDP1-205ENST00000553527 COL1A2P08123 1366 aa26.58■■□□□ 1.84
TDP1-205ENST00000553527 ZBTB42B2RXF5 422 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms