RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 ERVV-2B6SEH9 535 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 K7ELQ4 463 aaPredicted RBP5.41□□□□□ -1.54
PFDN5-219ENST00000553171 NDC80O14777 642 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 CYTH3O43739 400 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 ATP6V1G1O75348 118 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 INMTO95050 263 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 TFRCP02786 760 aaKnown RBP5.41□□□□□ -1.54
PFDN5-219ENST00000553171 IVLP07476 585 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 IFIT2P09913 472 aaKnown RBP5.41□□□□□ -1.54
PFDN5-219ENST00000553171 EPB42P16452 691 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 TNFAIP3P21580 790 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 GRK4P32298 578 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 ATP6V1E1P36543 226 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 HSD17B2P37059 387 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 MTHFRP42898 656 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 STT3AP46977 705 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 CLCN2P51788 898 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 LIMK1P53667 647 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 EPHB1P54762 984 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 ST5P78524 1137 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 DR1Q01658 176 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 PFKPQ01813 784 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 ARID5AQ03989 594 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 PTPN12Q05209 780 aaKnown RBP5.41□□□□□ -1.54
PFDN5-219ENST00000553171 DPYSQ14117 519 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 MAP7Q14244 749 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 LBRQ14739 615 aaKnown RBP5.41□□□□□ -1.54
PFDN5-219ENST00000553171 TAF1CQ15572 869 aaPredicted RBP5.41□□□□□ -1.54
PFDN5-219ENST00000553171 LRRFIP1Q32MZ4 808 aaKnown RBP5.41□□□□□ -1.54
PFDN5-219ENST00000553171 LRRC23Q53EV4 343 aaPredicted RBP5.41□□□□□ -1.54
PFDN5-219ENST00000553171 CAVIN4Q5BKX8 364 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 DACT2Q5SW24 774 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 FKBP15Q5T1M5 1219 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 THOC7Q6I9Y2 204 aaKnown RBP5.41□□□□□ -1.54
PFDN5-219ENST00000553171 MZT2AQ6P582 158 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 CRTC1Q6UUV9 634 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 ANGPTL8Q6UXH0 198 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 TMEM92Q6UXU6 159 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 CLEC17AQ6ZS10 378 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 ARHGAP22Q7Z5H3 698 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 MILR1Q7Z6M3 343 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 DDX42Q86XP3 938 aaKnown RBP eCLIP5.41□□□□□ -1.54
PFDN5-219ENST00000553171 RAB11FIP4Q86YS3 637 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 VPS52Q8N1B4 723 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 IQUBQ8NA54 791 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 CCDC148Q8NFR7 591 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 SPIRE2Q8WWL2 714 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 ARHGAP45Q92619 1136 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 SLC35B4Q969S0 331 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 TRMT2BQ96GJ1 504 aaKnown RBP5.41□□□□□ -1.54
PFDN5-219ENST00000553171 RBM18Q96H35 190 aaKnown RBP5.41□□□□□ -1.54
PFDN5-219ENST00000553171 TTPALQ9BTX7 342 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 CENPOQ9BU64 300 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 STK31Q9BXU1 1019 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 TRIM4Q9C037 500 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 CRISPLD2Q9H0B8 497 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 BRD9Q9H8M2 597 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 PANK3Q9H999 370 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 CYLDQ9NQC7 956 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 MRGBPQ9NV56 204 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 DDX25Q9UHL0 483 aaKnown RBP5.41□□□□□ -1.54
PFDN5-219ENST00000553171 MYO6Q9UM54 1294 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 SPG7Q9UQ90 795 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 DAAM1Q9Y4D1 1078 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 ANGPTL3Q9Y5C1 460 aa5.41□□□□□ -1.54
PFDN5-219ENST00000553171 TJP1Q07157 1748 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 GCN1Q92616 2671 aaKnown RBP5.4□□□□□ -1.54
PFDN5-219ENST00000553171 ARPC4-TTLL3A0A0A6YYG9 625 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 PRAMEF22A3QJZ6 481 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 GOLGA6L9A6NEM1 432 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 TMEM221A6NGB7 291 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 BTBD11A6QL63 1104 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 K7ENM7 598 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 PLOD2O00469 737 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 NDUFAB1O14561 156 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 PPIP5K2O43314 1243 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 PTCD1O75127 700 aaKnown RBP5.4□□□□□ -1.54
PFDN5-219ENST00000553171 ADAMTS4O75173 837 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 RTN2O75298 545 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 APBB3O95704 486 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 CYP17A1P05093 508 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 VIMP08670 466 aaKnown RBP5.4□□□□□ -1.54
PFDN5-219ENST00000553171 ENDOUP21128 410 aaKnown RBP5.4□□□□□ -1.54
PFDN5-219ENST00000553171 HALP42357 657 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 RANBP1P43487 201 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 ASMTP46597 345 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 SLC4A3P48751 1232 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 FNTAP49354 379 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 GJA9P57773 515 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 RELQ04864 619 aaPredicted RBP5.4□□□□□ -1.54
PFDN5-219ENST00000553171 CBLBQ13191 982 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 CUL4BQ13620 913 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 TTLL12Q14166 644 aaPredicted RBP5.4□□□□□ -1.54
PFDN5-219ENST00000553171 PPP1R7Q15435 360 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 ST3GAL2Q16842 350 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 IMMTQ16891 758 aaKnown RBP5.4□□□□□ -1.54
PFDN5-219ENST00000553171 C15orf59Q2T9L4 293 aaPredicted RBP5.4□□□□□ -1.54
PFDN5-219ENST00000553171 KRT71Q3SY84 523 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 DCAF8Q5TAQ9 597 aa5.4□□□□□ -1.54
PFDN5-219ENST00000553171 PHLDB3Q6NSJ2 640 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms