RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 TMEM92Q6UXU6 159 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.17□□□□□ -0.78
TMEM116-213ENST00000550831 PNMA8AQ86V59 439 aaPredicted RBP10.17□□□□□ -0.78
TMEM116-213ENST00000550831 ZC3H15Q8WU90 426 aaKnown RBP10.17□□□□□ -0.78
TMEM116-213ENST00000550831 SCFD1Q8WVM8 642 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 HPS3Q969F9 1004 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 ATG4CQ96DT6 458 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 ABHD8Q96I13 439 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 TRERF1Q96PN7 1200 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 SENP7Q9BQF6 1050 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 REEP2Q9BRK0 252 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 PDCD2LQ9BRP1 358 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 UNC45AQ9H3U1 944 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 AGO4Q9HCK5 861 aaKnown RBP10.17□□□□□ -0.78
TMEM116-213ENST00000550831 KCNH7Q9NS40 1196 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 HOXC10Q9NYD6 342 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 ZNF214Q9UL59 606 aaPredicted RBP10.17□□□□□ -0.78
TMEM116-213ENST00000550831 PPP2R2CQ9Y2T4 447 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 COL4A3BPQ9Y5P4 624 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 SNCAIPQ9Y6H5 919 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 ZHX2Q9Y6X8 837 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 PHLPP2Q6ZVD8 1323 aa10.17□□□□□ -0.78
TMEM116-213ENST00000550831 CTIFO43310 598 aaKnown RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 COBLO75128 1261 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 P4HBP07237 508 aaKnown RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 MAPTP10636 758 aaKnown RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 ETF1P62495 437 aaKnown RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 MAP2K1Q02750 393 aaPredicted RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 PPP2R3AQ06190 1150 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 TBC1D8BQ0IIM8 1120 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 PABPC4Q13310 644 aaKnown RBP eCLIP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 SYCP1Q15431 976 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 VWA3BQ502W6 1294 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 TRIM65Q6PJ69 517 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 CYP26C1Q6V0L0 522 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 LBX2Q6XYB7 198 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 RNF207Q6ZRF8 634 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 ZNF662Q6ZS27 426 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 VSIG10LQ86VR7 867 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 OR8K1Q8NGG5 319 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 KIF18AQ8NI77 898 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 GPRASP2Q96D09 838 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 DYDC2Q96IM9 177 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 NOC4LQ9BVI4 516 aaKnown RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 TIPINQ9BVW5 301 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 TEX13BQ9BXU2 312 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 BHMT2Q9H2M3 363 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 PXMP2Q9NR77 195 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 RGL1Q9NZL6 768 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 TMOD4Q9NZQ9 345 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 DBR1Q9UK59 544 aaKnown RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 CTDP1Q9Y5B0 961 aaPredicted RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 UQCRHLA0A096LP55 91 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 TTC26A0AVF1 554 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 SSBP05455 408 aaKnown RBP eCLIP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 KRT18P05783 430 aaKnown RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 UQCRHP07919 91 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 SFNP31947 248 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 KRT9P35527 623 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 MTIF2P46199 727 aaKnown RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 HMGCS2P54868 508 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 ZBED6P86452 979 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 GOLGA8FQ08AF8 430 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 GOLGA8DPQ0D2H9 430 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 PTPN21Q16825 1174 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 KNOP1Q1ED39 458 aaKnown RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 FKBP15Q5T1M5 1219 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 USP50Q70EL3 339 aaPredicted RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 TRIM59Q8IWR1 403 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 CPXCR1Q8N123 301 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 GLIS3Q8NEA6 775 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 CHST13Q8NET6 341 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 IL31RAQ8NI17 732 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 INPP4AQ96PE3 977 aaPredicted RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 TAAR1Q96RJ0 339 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 RUSC1Q9BVN2 902 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 STRA6Q9BX79 667 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 NDST4Q9H3R1 872 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 ZSWIM4Q9H7M6 989 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 L2HGDHQ9H9P8 463 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 RNF146Q9NTX7 359 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 TRMT1Q9NXH9 659 aaKnown RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 FAM184BQ9ULE4 1060 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 SIK3Q9Y2K2 1263 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 LUC7L2Q9Y383 392 aaKnown RBP10.16□□□□□ -0.78
TMEM116-213ENST00000550831 ADGRG1Q9Y653 693 aa10.16□□□□□ -0.78
TMEM116-213ENST00000550831 LCTP09848 1927 aa10.15□□□□□ -0.78
TMEM116-213ENST00000550831 NPHP3-ACAD11A0A0J9YXS1 232 aa10.15□□□□□ -0.79
TMEM116-213ENST00000550831 UNCXA6NJT0 531 aa10.15□□□□□ -0.79
TMEM116-213ENST00000550831 SPDYE16A6NNV3 312 aaPredicted RBP10.15□□□□□ -0.79
TMEM116-213ENST00000550831 B4DLN1 442 aa10.15□□□□□ -0.79
TMEM116-213ENST00000550831 RNF225M0QZC1 329 aaPredicted RBP10.15□□□□□ -0.79
TMEM116-213ENST00000550831 IRF6O14896 467 aa10.15□□□□□ -0.79
TMEM116-213ENST00000550831 SLC16A3O15427 465 aaKnown RBP10.15□□□□□ -0.79
TMEM116-213ENST00000550831 PPP1R12BO60237 982 aaPredicted RBP10.15□□□□□ -0.79
TMEM116-213ENST00000550831 CCDC175P0C221 793 aa10.15□□□□□ -0.79
TMEM116-213ENST00000550831 JAK3P52333 1124 aa10.15□□□□□ -0.79
TMEM116-213ENST00000550831 MCCD1P59942 119 aaPredicted RBP10.15□□□□□ -0.79
TMEM116-213ENST00000550831 FOXK1P85037 733 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms