RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 BMP2KLQ5H9B9 411 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 ANKRD54Q6NXT1 300 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 TAF2Q6P1X5 1199 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 RUFY4Q6ZNE9 571 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 TSHZ1Q6ZSZ6 1077 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 DGLUCYQ7Z3D6 616 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 TRIM50Q86XT4 487 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 NPAS4Q8IUM7 802 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 GPR20Q99678 358 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 ESYT1Q9BSJ8 1104 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 SMOC2Q9H3U7 446 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 AGO3Q9H9G7 860 aaKnown RBP14.04□□□□□ -0.16
DDX54-206ENST00000549271 NR2E1Q9Y466 385 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 RBM8AQ9Y5S9 174 aaKnown RBP14.04□□□□□ -0.16
DDX54-206ENST00000549271 FRMPD4Q14CM0 1322 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 NRCAMQ92823 1304 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 ZFHX4Q86UP3 3567 aa14.03□□□□□ -0.16
DDX54-206ENST00000549271 ACACBO00763 2458 aa14.03□□□□□ -0.16
DDX54-206ENST00000549271 PNMA6FA0A0J9YX94 578 aa14.03□□□□□ -0.16
DDX54-206ENST00000549271 NOP56O00567 594 aaKnown RBP14.03□□□□□ -0.16
DDX54-206ENST00000549271 CYTH3O43739 400 aa14.03□□□□□ -0.16
DDX54-206ENST00000549271 STAM2O75886 525 aa14.03□□□□□ -0.16
DDX54-206ENST00000549271 SP100P23497 879 aaPredicted RBP14.03□□□□□ -0.16
DDX54-206ENST00000549271 CCND2P30279 289 aa14.03□□□□□ -0.16
DDX54-206ENST00000549271 HOXA13P31271 388 aaPredicted RBP14.03□□□□□ -0.16
DDX54-206ENST00000549271 RASGRP4Q8TDF6 673 aa14.03□□□□□ -0.16
DDX54-206ENST00000549271 MICAL1Q8TDZ2 1067 aa14.03□□□□□ -0.16
DDX54-206ENST00000549271 PIGSQ96S52 555 aa14.03□□□□□ -0.16
DDX54-206ENST00000549271 ZNF215Q9UL58 517 aaPredicted RBP14.03□□□□□ -0.16
DDX54-206ENST00000549271 ERICH2A1L162 156 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 IFIT3O14879 490 aaKnown RBP14.02□□□□□ -0.17
DDX54-206ENST00000549271 FSCN2O14926 492 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 PPFIA3O75145 1194 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 SRGAP2BP0DMP2 458 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 TECP42680 631 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 GATMP50440 423 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 ERVFC1P60507 584 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 SART3Q15020 963 aaKnown RBP14.02□□□□□ -0.17
DDX54-206ENST00000549271 CWF19L1Q69YN2 538 aaKnown RBP14.02□□□□□ -0.17
DDX54-206ENST00000549271 PDE12Q6L8Q7 609 aaKnown RBP14.02□□□□□ -0.17
DDX54-206ENST00000549271 METTL7BQ6UX53 244 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 HOMER1Q86YM7 354 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 CCDC136Q96JN2 1154 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 ZFP91Q96JP5 570 aaPredicted RBP14.02□□□□□ -0.17
DDX54-206ENST00000549271 MAP3K14Q99558 947 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 FTHL17Q9BXU8 183 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 SENP2Q9HC62 589 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 TELO2Q9Y4R8 837 aa14.02□□□□□ -0.17
DDX54-206ENST00000549271 OTOGLQ3ZCN5 2332 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 C2CD4DB7Z1M9 353 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 STAG3L1P0CL83 205 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 HOXB8P17481 243 aaPredicted RBP14.01□□□□□ -0.17
DDX54-206ENST00000549271 SMARCA1P28370 1054 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 CD52P31358 61 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 ANTXR2P58335 489 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 COL9A3Q14050 684 aaPredicted RBP14.01□□□□□ -0.17
DDX54-206ENST00000549271 NEDD9Q14511 834 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 WTAPQ15007 396 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 GNPTABQ3T906 1256 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 CYFIP1Q7L576 1253 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 NCOA7Q8NI08 942 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 CNTNAP3BQ96NU0 1288 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 INPP4AQ96PE3 977 aaPredicted RBP14.01□□□□□ -0.17
DDX54-206ENST00000549271 MTA3Q9BTC8 594 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 CNTNAP3Q9BZ76 1288 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 TSHZ2Q9NRE2 1034 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 PCDHB12Q9Y5F1 795 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 CDY2AQ9Y6F7 541 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 CFAP47Q6ZTR5 3102 aa14.01□□□□□ -0.17
DDX54-206ENST00000549271 MBLAC1A4D2B0 266 aaPredicted RBP14□□□□□ -0.17
DDX54-206ENST00000549271 SPATA31C2B4DYI2 1134 aa14□□□□□ -0.17
DDX54-206ENST00000549271 FGF18O76093 207 aa14□□□□□ -0.17
DDX54-206ENST00000549271 SCG2P13521 617 aa14□□□□□ -0.17
DDX54-206ENST00000549271 MRPS9P82933 396 aaKnown RBP14□□□□□ -0.17
DDX54-206ENST00000549271 SEMA3FQ13275 785 aa14□□□□□ -0.17
DDX54-206ENST00000549271 PUM1Q14671 1186 aaKnown RBP eCLIP14□□□□□ -0.172e-9■■■□□ 15.9
DDX54-206ENST00000549271 NECTIN1Q15223 517 aa14□□□□□ -0.17
DDX54-206ENST00000549271 UTP14CQ5TAP6 766 aaKnown RBP14□□□□□ -0.17
DDX54-206ENST00000549271 XRRA1Q6P2D8 792 aa14□□□□□ -0.17
DDX54-206ENST00000549271 CATIPQ7Z7H3 387 aa14□□□□□ -0.17
DDX54-206ENST00000549271 RALYLQ86SE5 291 aaKnown RBP14□□□□□ -0.17
DDX54-206ENST00000549271 RSPH3Q86UC2 560 aa14□□□□□ -0.17
DDX54-206ENST00000549271 FCHSD1Q86WN1 690 aa14□□□□□ -0.17
DDX54-206ENST00000549271 MB21D2Q8IYB1 491 aaPredicted RBP14□□□□□ -0.17
DDX54-206ENST00000549271 CCDC105Q8IYK2 499 aa14□□□□□ -0.17
DDX54-206ENST00000549271 IGDCC4Q8TDY8 1250 aa14□□□□□ -0.17
DDX54-206ENST00000549271 DNAJB3Q8WWF6 145 aa14□□□□□ -0.17
DDX54-206ENST00000549271 APOL5Q9BWW9 433 aa14□□□□□ -0.17
DDX54-206ENST00000549271 MFSD1Q9H3U5 465 aa14□□□□□ -0.17
DDX54-206ENST00000549271 POMKQ9H5K3 350 aa14□□□□□ -0.17
DDX54-206ENST00000549271 CDH22Q9UJ99 828 aa14□□□□□ -0.17
DDX54-206ENST00000549271 SQORQ9Y6N5 450 aa14□□□□□ -0.17
DDX54-206ENST00000549271 FANCMQ8IYD8 2048 aa14□□□□□ -0.17
DDX54-206ENST00000549271 PIK3CDO00329 1044 aa13.99□□□□□ -0.17
DDX54-206ENST00000549271 SLC27A2O14975 620 aa13.99□□□□□ -0.17
DDX54-206ENST00000549271 ARP10275 920 aa13.99□□□□□ -0.17
DDX54-206ENST00000549271 AOC1P19801 751 aa13.99□□□□□ -0.17
DDX54-206ENST00000549271 MRPS6P82932 125 aaKnown RBP13.99□□□□□ -0.17
DDX54-206ENST00000549271 ANGPT1Q15389 498 aa13.99□□□□□ -0.17
DDX54-206ENST00000549271 MARCH8Q5T0T0 291 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms