RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 SENP6Q9GZR1 1112 aaPredicted RBP23.63■■□□□ 1.37
CACNB3-210ENST00000548874 MYH9P35579 1960 aaKnown RBP23.63■■□□□ 1.37
CACNB3-210ENST00000548874 A0A0U1RQG5 324 aaPredicted RBP23.62■■□□□ 1.37
CACNB3-210ENST00000548874 POTEB3A0JP26 581 aa23.62■■□□□ 1.37
CACNB3-210ENST00000548874 OATP04181 439 aa23.62■■□□□ 1.37
CACNB3-210ENST00000548874 ITGA7Q13683 1181 aa23.62■■□□□ 1.37
CACNB3-210ENST00000548874 ECM1Q16610 540 aa23.62■■□□□ 1.37
CACNB3-210ENST00000548874 SPECC1Q5M775 1068 aa23.62■■□□□ 1.37
CACNB3-210ENST00000548874 NFRKBQ6P4R8 1299 aa23.62■■□□□ 1.37
CACNB3-210ENST00000548874 POTEBQ6S5H4 581 aa23.62■■□□□ 1.37
CACNB3-210ENST00000548874 SHC4Q6S5L8 630 aa23.62■■□□□ 1.37
CACNB3-210ENST00000548874 CABP7Q86V35 215 aa23.62■■□□□ 1.37
CACNB3-210ENST00000548874 SESTD1Q86VW0 696 aa23.62■■□□□ 1.37
CACNB3-210ENST00000548874 BBXQ8WY36 941 aaPredicted RBP23.62■■□□□ 1.37
CACNB3-210ENST00000548874 SYMPKQ92797 1274 aaKnown RBP23.62■■□□□ 1.37
CACNB3-210ENST00000548874 EPSTI1Q96J88 318 aa23.62■■□□□ 1.37
CACNB3-210ENST00000548874 FAM167AQ96KS9 214 aa23.62■■□□□ 1.37
CACNB3-210ENST00000548874 HOXC8P31273 242 aa23.61■■□□□ 1.37
CACNB3-210ENST00000548874 UBA7P41226 1012 aa23.61■■□□□ 1.37
CACNB3-210ENST00000548874 SNX17Q15036 470 aa23.61■■□□□ 1.37
CACNB3-210ENST00000548874 XKR3Q5GH77 459 aa23.61■■□□□ 1.37
CACNB3-210ENST00000548874 ADALQ6DHV7 355 aa23.61■■□□□ 1.37
CACNB3-210ENST00000548874 CKAP2LQ8IYA6 745 aa23.61■■□□□ 1.37
CACNB3-210ENST00000548874 VTI1AQ96AJ9 217 aa23.61■■□□□ 1.37
CACNB3-210ENST00000548874 PNMA5Q96PV4 448 aa23.61■■□□□ 1.37
CACNB3-210ENST00000548874 SEZ6LQ9BYH1 1024 aa23.61■■□□□ 1.37
CACNB3-210ENST00000548874 KDM3AQ9Y4C1 1321 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 ARVCFO00192 962 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 HBP1O60381 514 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 SMIM10L2AP0DMW4 78 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 SMIM10L2BP0DMW5 78 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 CDK7P50613 346 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 PTPN11Q06124 597 aaPredicted RBP23.6■■□□□ 1.37
CACNB3-210ENST00000548874 GRB10Q13322 594 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 C1orf53Q5VUE5 145 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 POTEGQ6S5H5 508 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 SLC39A5Q6ZMH5 540 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 ANO5Q75V66 913 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 TMEM87AQ8NBN3 555 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 NIFKQ9BYG3 293 aaKnown RBP23.6■■□□□ 1.37
CACNB3-210ENST00000548874 HDAC6Q9UBN7 1215 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 TRPC6Q9Y210 931 aa23.6■■□□□ 1.37
CACNB3-210ENST00000548874 INSRRP14616 1297 aa23.59■■□□□ 1.37
CACNB3-210ENST00000548874 CHMP4BP1P59074 171 aa23.59■■□□□ 1.37
CACNB3-210ENST00000548874 TMEM119Q4V9L6 283 aa23.59■■□□□ 1.37
CACNB3-210ENST00000548874 RESP18Q5W5W9 173 aa23.59■■□□□ 1.37
CACNB3-210ENST00000548874 KCTD17Q8N5Z5 321 aa23.59■■□□□ 1.37
CACNB3-210ENST00000548874 C7orf31Q8N865 590 aa23.59■■□□□ 1.37
CACNB3-210ENST00000548874 PPP1R13LQ8WUF5 828 aa23.59■■□□□ 1.37
CACNB3-210ENST00000548874 NRBP2Q9NSY0 501 aa23.59■■□□□ 1.37
CACNB3-210ENST00000548874 GTF2IRD1Q9UHL9 959 aa23.59■■□□□ 1.37
CACNB3-210ENST00000548874 COL1A2P08123 1366 aa23.58■■□□□ 1.37
CACNB3-210ENST00000548874 A0A1W2PQ27 194 aa23.58■■□□□ 1.37
CACNB3-210ENST00000548874 A0A1W2PQ64 194 aa23.58■■□□□ 1.37
CACNB3-210ENST00000548874 A0A1W2PQD8 194 aa23.58■■□□□ 1.37
CACNB3-210ENST00000548874 ZBTB42B2RXF5 422 aa23.58■■□□□ 1.37
CACNB3-210ENST00000548874 ZBTB39O15060 712 aa23.58■■□□□ 1.37
CACNB3-210ENST00000548874 XRCC6P12956 609 aaKnown RBP eCLIP23.58■■□□□ 1.37
CACNB3-210ENST00000548874 YWHABP31946 246 aaKnown RBP23.58■■□□□ 1.37
CACNB3-210ENST00000548874 PPFIA1Q13136 1202 aa23.58■■□□□ 1.37
CACNB3-210ENST00000548874 KARSQ15046 597 aaKnown RBP23.58■■□□□ 1.37
CACNB3-210ENST00000548874 TARBP2Q15633 366 aaKnown RBP23.58■■□□□ 1.37
CACNB3-210ENST00000548874 CSPP1Q1MSJ5 1256 aa23.58■■□□□ 1.37
CACNB3-210ENST00000548874 NACC1Q96RE7 527 aa23.58■■□□□ 1.37
CACNB3-210ENST00000548874 NT5C3AQ9H0P0 336 aa23.58■■□□□ 1.37
CACNB3-210ENST00000548874 DDX19AQ9NUU7 478 aaKnown RBP23.58■■□□□ 1.37
CACNB3-210ENST00000548874 KIAA1024Q9UPX6 916 aa23.58■■□□□ 1.37
CACNB3-210ENST00000548874 NRCAMQ92823 1304 aa23.58■■□□□ 1.36
CACNB3-210ENST00000548874 TMEM150BA6NC51 233 aa23.57■■□□□ 1.36
CACNB3-210ENST00000548874 DDX11L8A8MPP1 907 aa23.57■■□□□ 1.36
CACNB3-210ENST00000548874 CMA1P23946 247 aa23.57■■□□□ 1.36
CACNB3-210ENST00000548874 TXLNAP40222 546 aa23.57■■□□□ 1.36
CACNB3-210ENST00000548874 ADAM17P78536 824 aa23.57■■□□□ 1.36
CACNB3-210ENST00000548874 HIC1Q14526 733 aa23.57■■□□□ 1.36
CACNB3-210ENST00000548874 GRIK4Q16099 956 aa23.57■■□□□ 1.36
CACNB3-210ENST00000548874 ZNF484Q5JVG2 852 aa23.57■■□□□ 1.36
CACNB3-210ENST00000548874 TRMT1LQ7Z2T5 733 aaKnown RBP23.57■■□□□ 1.36
CACNB3-210ENST00000548874 LMBR1Q8WVP7 490 aa23.57■■□□□ 1.36
CACNB3-210ENST00000548874 CALML4Q96GE6 196 aa23.57■■□□□ 1.36
CACNB3-210ENST00000548874 CEP89Q96ST8 783 aa23.57■■□□□ 1.36
CACNB3-210ENST00000548874 ANKEF1Q9NU02 776 aa23.57■■□□□ 1.36
CACNB3-210ENST00000548874 SEPT9Q9UHD8 586 aaPredicted RBP23.57■■□□□ 1.36
CACNB3-210ENST00000548874 ATN1P54259 1190 aaPredicted RBP23.56■■□□□ 1.36
CACNB3-210ENST00000548874 FAM47CQ5HY64 1035 aa23.56■■□□□ 1.36
CACNB3-210ENST00000548874 OTUD6AQ7L8S5 288 aa23.56■■□□□ 1.36
CACNB3-210ENST00000548874 KCNK18Q7Z418 384 aa23.56■■□□□ 1.36
CACNB3-210ENST00000548874 PIGOQ8TEQ8 1089 aa23.56■■□□□ 1.36
CACNB3-210ENST00000548874 LRRC15Q8TF66 581 aa23.56■■□□□ 1.36
CACNB3-210ENST00000548874 CDK5RAP3Q96JB5 506 aa23.56■■□□□ 1.36
CACNB3-210ENST00000548874 SETD4Q9NVD3 440 aa23.56■■□□□ 1.36
CACNB3-210ENST00000548874 DBR1Q9UK59 544 aaKnown RBP23.56■■□□□ 1.36
CACNB3-210ENST00000548874 A0A087WWV3 80 aa23.55■■□□□ 1.36
CACNB3-210ENST00000548874 A0A087X0B3 334 aa23.55■■□□□ 1.36
CACNB3-210ENST00000548874 FAM237AA0A1B0GTK4 181 aa23.55■■□□□ 1.36
CACNB3-210ENST00000548874 C17orf102A2RUQ5 167 aa23.55■■□□□ 1.36
CACNB3-210ENST00000548874 MBLAC1A4D2B0 266 aaPredicted RBP23.55■■□□□ 1.36
CACNB3-210ENST00000548874 RRN3P2A6NIE6 340 aa23.55■■□□□ 1.36
CACNB3-210ENST00000548874 PLCG1P19174 1290 aa23.55■■□□□ 1.36
CACNB3-210ENST00000548874 ZRSR1Q15695 479 aaKnown RBP23.55■■□□□ 1.36
CACNB3-210ENST00000548874 MARCH8Q5T0T0 291 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms