RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 H3BRB1 525 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 ZNF862O60290 1169 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 DKC1O60832 514 aaKnown RBP eCLIP14.67□□□□□ -0.06
DDX11-227ENST00000544652 STBD1O95210 358 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 ZNF286BP0CG31 522 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 ACLYP53396 1101 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 PSMC5P62195 406 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 SPECC1Q5M775 1068 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 UTP14CQ5TAP6 766 aaKnown RBP14.67□□□□□ -0.06
DDX11-227ENST00000544652 RESP18Q5W5W9 173 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 KRT79Q5XKE5 535 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 CABP7Q86V35 215 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 TRIM50Q86XT4 487 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 BANK1Q8NDB2 785 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 SNX29Q8TEQ0 813 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 SYMPKQ92797 1274 aaKnown RBP14.67□□□□□ -0.06
DDX11-227ENST00000544652 ATP6V0A1Q93050 837 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 EPSTI1Q96J88 318 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 GBP4Q96PP9 640 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 LXNQ9BS40 222 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 MTG1Q9BT17 334 aaPredicted RBP14.67□□□□□ -0.06
DDX11-227ENST00000544652 KATNAL1Q9BW62 490 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 TUT1Q9H6E5 874 aaKnown RBP14.67□□□□□ -0.06
DDX11-227ENST00000544652 AZI2Q9H6S1 392 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 ZSWIM4Q9H7M6 989 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 ERAP1Q9NZ08 941 aa14.67□□□□□ -0.06
DDX11-227ENST00000544652 WRAP73Q9P2S5 460 aaPredicted RBP14.67□□□□□ -0.06
DDX11-227ENST00000544652 KIAA0100Q14667 2235 aaKnown RBP14.67□□□□□ -0.06
DDX11-227ENST00000544652 KDM3AQ9Y4C1 1321 aa14.66□□□□□ -0.06
DDX11-227ENST00000544652 KBTBD13C9JR72 458 aa14.66□□□□□ -0.06
DDX11-227ENST00000544652 BACH1O14867 736 aa14.66□□□□□ -0.06
DDX11-227ENST00000544652 CABYRO75952 493 aa14.66□□□□□ -0.06
DDX11-227ENST00000544652 TFRCP02786 760 aaKnown RBP14.66□□□□□ -0.06
DDX11-227ENST00000544652 MYL3P08590 195 aa14.66□□□□□ -0.06
DDX11-227ENST00000544652 CMA1P23946 247 aa14.66□□□□□ -0.06
DDX11-227ENST00000544652 UBA7P41226 1012 aa14.66□□□□□ -0.06
DDX11-227ENST00000544652 CYP4A11Q02928 519 aa14.66□□□□□ -0.06
DDX11-227ENST00000544652 CTTNQ14247 550 aaKnown RBP14.66□□□□□ -0.06
DDX11-227ENST00000544652 ECM1Q16610 540 aa14.66□□□□□ -0.06
DDX11-227ENST00000544652 PDXDC2PQ6P474 469 aa14.66□□□□□ -0.06
DDX11-227ENST00000544652 CXCL17Q6UXB2 119 aa14.66□□□□□ -0.06
DDX11-227ENST00000544652 GLG1Q92896 1179 aa14.66□□□□□ -0.06
DDX11-227ENST00000544652 PNMA5Q96PV4 448 aa14.66□□□□□ -0.06
DDX11-227ENST00000544652 ZNF215Q9UL58 517 aaPredicted RBP14.66□□□□□ -0.06
DDX11-227ENST00000544652 A0A1W2PQ45 241 aaPredicted RBP14.65□□□□□ -0.06
DDX11-227ENST00000544652 A0A1W2PQY0 241 aa14.65□□□□□ -0.06
DDX11-227ENST00000544652 POTEB3A0JP26 581 aa14.65□□□□□ -0.06
DDX11-227ENST00000544652 COL6A1P12109 1028 aa14.65□□□□□ -0.06
DDX11-227ENST00000544652 XRCC6P12956 609 aaKnown RBP eCLIP14.65□□□□□ -0.06
DDX11-227ENST00000544652 CCT6AP40227 531 aaKnown RBP14.65□□□□□ -0.06
DDX11-227ENST00000544652 PSEN1P49768 467 aa14.65□□□□□ -0.06
DDX11-227ENST00000544652 GRB10Q13322 594 aa14.65□□□□□ -0.06
DDX11-227ENST00000544652 PLCB4Q15147 1175 aa14.65□□□□□ -0.06
DDX11-227ENST00000544652 TMEM119Q4V9L6 283 aa14.65□□□□□ -0.06
DDX11-227ENST00000544652 POTEBQ6S5H4 581 aa14.65□□□□□ -0.06
DDX11-227ENST00000544652 TPH2Q8IWU9 490 aa14.65□□□□□ -0.06
DDX11-227ENST00000544652 ABHD8Q96I13 439 aa14.65□□□□□ -0.06
DDX11-227ENST00000544652 NIFKQ9BYG3 293 aaKnown RBP14.65□□□□□ -0.06
DDX11-227ENST00000544652 NT5C3AQ9H0P0 336 aa14.65□□□□□ -0.06
DDX11-227ENST00000544652 RNPEPQ9H4A4 650 aa14.65□□□□□ -0.06
DDX11-227ENST00000544652 HPSEQ9Y251 543 aa14.65□□□□□ -0.06
DDX11-227ENST00000544652 TANC1Q9C0D5 1861 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 OATP04181 439 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 HOXC8P31273 242 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 TXLNAP40222 546 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 PSEN2P49810 448 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 PRKCEQ02156 737 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 MFSD10Q14728 455 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 KIAA0753Q2KHM9 967 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 XKR3Q5GH77 459 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 POTEGQ6S5H5 508 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 SESTD1Q86VW0 696 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 ATP8B4Q8TF62 1192 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 CALML4Q96GE6 196 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 FAM167AQ96KS9 214 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 GLT1D1Q96MS3 346 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 BRCA2P51587 3418 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 GRIN2DO15399 1336 aa14.64□□□□□ -0.07
DDX11-227ENST00000544652 COL1A2P08123 1366 aa14.63□□□□□ -0.07
DDX11-227ENST00000544652 A0A087X0B3 334 aa14.63□□□□□ -0.07
DDX11-227ENST00000544652 HBP1O60381 514 aa14.63□□□□□ -0.07
DDX11-227ENST00000544652 YWHABP31946 246 aaKnown RBP14.63□□□□□ -0.07
DDX11-227ENST00000544652 KARSQ15046 597 aaKnown RBP14.63□□□□□ -0.07
DDX11-227ENST00000544652 TARBP2Q15633 366 aaKnown RBP14.63□□□□□ -0.07
DDX11-227ENST00000544652 ANO5Q75V66 913 aa14.63□□□□□ -0.07
DDX11-227ENST00000544652 SLC43A3Q8NBI5 491 aa14.63□□□□□ -0.07
DDX11-227ENST00000544652 LRRC15Q8TF66 581 aa14.63□□□□□ -0.07
DDX11-227ENST00000544652 MRPS27Q92552 414 aaKnown RBP14.63□□□□□ -0.07
DDX11-227ENST00000544652 NACC1Q96RE7 527 aa14.63□□□□□ -0.07
DDX11-227ENST00000544652 CEP89Q96ST8 783 aa14.63□□□□□ -0.07
DDX11-227ENST00000544652 SEZ6LQ9BYH1 1024 aa14.63□□□□□ -0.07
DDX11-227ENST00000544652 ANKEF1Q9NU02 776 aa14.63□□□□□ -0.07
DDX11-227ENST00000544652 DDX19AQ9NUU7 478 aaKnown RBP14.63□□□□□ -0.07
DDX11-227ENST00000544652 FAM13BQ9NYF5 915 aa14.63□□□□□ -0.07
DDX11-227ENST00000544652 CCDC39Q9UFE4 941 aa14.63□□□□□ -0.07
DDX11-227ENST00000544652 DBR1Q9UK59 544 aaKnown RBP14.63□□□□□ -0.07
DDX11-227ENST00000544652 KIAA1024Q9UPX6 916 aa14.63□□□□□ -0.07
DDX11-227ENST00000544652 ZBTB42B2RXF5 422 aa14.62□□□□□ -0.07
DDX11-227ENST00000544652 GADD45BO75293 160 aaPredicted RBP14.62□□□□□ -0.07
DDX11-227ENST00000544652 PRPF40AO75400 957 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms