RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 YEATS4O95619 227 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 CLTBP09497 229 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 INSRRP14616 1297 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 UBA7P41226 1012 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 ME1P48163 572 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 PDIA5Q14554 519 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 SLC39A14Q15043 492 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 UGCGQ16739 394 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 XKR3Q5GH77 459 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 ZNF484Q5JVG2 852 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 ATL3Q6DD88 541 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 GDF6Q6KF10 455 aaPredicted RBP7.07□□□□□ -1.28
LTBR-212ENST00000543542 UBE2Q1Q7Z7E8 422 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 CABP7Q86V35 215 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 KRI1Q8N9T8 703 aaKnown RBP7.07□□□□□ -1.28
LTBR-212ENST00000543542 RETREG2Q8NC44 543 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 ATP8B4Q8TF62 1192 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 CALML4Q96GE6 196 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 CEP170P1Q96L14 293 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 SPATA32Q96LK8 384 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 PCYT2Q99447 389 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 TRPV6Q9H1D0 765 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 TUFT1Q9NNX1 390 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 TRMT13Q9NUP7 481 aaKnown RBP7.07□□□□□ -1.28
LTBR-212ENST00000543542 RGL1Q9NZL6 768 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 GTF2IRD1Q9UHL9 959 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 TUBE1Q9UJT0 475 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 CIZ1Q9ULV3 898 aaPredicted RBP7.07□□□□□ -1.28
LTBR-212ENST00000543542 MAFBQ9Y5Q3 323 aaPredicted RBP7.07□□□□□ -1.28
LTBR-212ENST00000543542 GRIN2DO15399 1336 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 KDM3AQ9Y4C1 1321 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 SCN10AQ9Y5Y9 1956 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 ALPK3Q96L96 1907 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 GOLGA6L4A6NEF3 574 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 PP2D1A8MPX8 630 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 M0QZ92 97 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 TREHO43280 583 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 B4GALT4O60513 344 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 MED24O75448 989 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 SLITRK3O94933 977 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 CYP2C9P11712 490 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 RAG1P15918 1043 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 SYN1P17600 705 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 TMOD1P28289 359 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 CDC25AP30304 524 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 YWHABP31946 246 aaKnown RBP7.06□□□□□ -1.28
LTBR-212ENST00000543542 LONP1P36776 959 aaKnown RBP7.06□□□□□ -1.28
LTBR-212ENST00000543542 NASPP49321 788 aaPredicted RBP7.06□□□□□ -1.28
LTBR-212ENST00000543542 CDK7P50613 346 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 ZNF200P98182 395 aaPredicted RBP7.06□□□□□ -1.28
LTBR-212ENST00000543542 SPIRE1Q08AE8 756 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 TBC1D8BQ0IIM8 1120 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 BFSP2Q13515 415 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 SNX17Q15036 470 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 PTPAQ15257 358 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 XKR9Q5GH70 373 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 C1orf53Q5VUE5 145 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 PLA2G4FQ68DD2 849 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 B3GNT9Q6UX72 402 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 ANKRD33Q7Z3H0 272 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 RSPH3Q86UC2 560 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 FAM126BQ8IXS8 530 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 METTL13Q8N6R0 699 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 IGSF22Q8N9C0 903 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 SLC43A3Q8NBI5 491 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 LINC00301Q8NCQ3 95 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 KCNG4Q8TDN1 519 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 LMBR1Q8WVP7 490 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 TRAPPC12Q8WVT3 735 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 AK8Q96MA6 479 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 TOX2Q96NM4 488 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 NACC1Q96RE7 527 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 PLIN2Q99541 437 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 LBHD1Q9BQE6 289 aaPredicted RBP7.06□□□□□ -1.28
LTBR-212ENST00000543542 SH2D3AQ9BRG2 576 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 POLR3CQ9BUI4 534 aaPredicted RBP7.06□□□□□ -1.28
LTBR-212ENST00000543542 PPP1R12CQ9BZL4 782 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 SCAND2PQ9GZW5 306 aaPredicted RBP7.06□□□□□ -1.28
LTBR-212ENST00000543542 NT5C3AQ9H0P0 336 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 FAM49AQ9H0Q0 323 aaPredicted RBP7.06□□□□□ -1.28
LTBR-212ENST00000543542 CSRNP2Q9H175 543 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 SUGCTQ9HAC7 445 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 BMP2KQ9NSY1 1161 aaPredicted RBP7.06□□□□□ -1.28
LTBR-212ENST00000543542 DDX19AQ9NUU7 478 aaKnown RBP7.06□□□□□ -1.28
LTBR-212ENST00000543542 CCDC39Q9UFE4 941 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 ZMYND8Q9ULU4 1186 aaPredicted RBP7.06□□□□□ -1.28
LTBR-212ENST00000543542 KIAA1024Q9UPX6 916 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 ZDHHC9Q9Y397 364 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 SRPRBQ9Y5M8 271 aaKnown RBP7.06□□□□□ -1.28
LTBR-212ENST00000543542 KIAA0100Q14667 2235 aaKnown RBP7.06□□□□□ -1.28
LTBR-212ENST00000543542 COL1A2P08123 1366 aa7.06□□□□□ -1.28
LTBR-212ENST00000543542 A0A087WWV3 80 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 ARHGEF35A5YM69 484 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 TMEM150BA6NC51 233 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 MAGEB2O15479 319 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 ZNF862O60290 1169 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 CUTAO60888 179 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 PPP6R2O75170 966 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 SSBP05455 408 aaKnown RBP eCLIP7.05□□□□□ -1.28
LTBR-212ENST00000543542 ATP4AP20648 1035 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms