RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 FAM26FQ5R3K3 315 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 GPATCH4Q5T3I0 446 aaKnown RBP5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 HAUS3Q68CZ6 603 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 CCDC70Q6NSX1 233 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 DPY19L2P1Q6NXN4 242 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 MOXD1Q6UVY6 613 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 DPP8Q6V1X1 898 aaPredicted RBP5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 LEKR1Q6ZMV7 388 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 TMC4Q7Z404 712 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SRLQ86TD4 932 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 AFAP1L1Q8TED9 768 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 HDAC7Q8WUI4 952 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 CRYGNQ8WXF5 182 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 CUL5Q93034 780 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 CAVIN3Q969G5 261 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 NOX5Q96PH1 765 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 ALS2CR12Q96Q35 445 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SYT17Q9BSW7 474 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 LRRC1Q9BTT6 524 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 PDGFDQ9GZP0 370 aaPredicted RBP5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 NT5C3AQ9H0P0 336 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 GLT8D2Q9H1C3 349 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 VRTNQ9H8Y1 702 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 DDX4Q9NQI0 724 aaKnown RBP5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 PANK4Q9NVE7 773 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 AIPL1Q9NZN9 384 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 FEZ2Q9UHY8 353 aaPredicted RBP5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 DMGDHQ9UI17 866 aaKnown RBP5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 MAFBQ9Y5Q3 323 aaPredicted RBP5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 PITPNM2Q9BZ72 1349 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 BTNL10A8MVZ5 291 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 USP17L10C9JJH3 530 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 RIMBP2O15034 1052 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 PHACTR2O75167 634 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SERPINB2P05120 415 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 CYP11B2P19099 503 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SLC12A3P55017 1021 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 NNTQ13423 1086 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 EDRF1Q3B7T1 1238 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 PROX2Q3B8N5 592 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SLC9C1Q4G0N8 1177 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 FAM83BQ5T0W9 1011 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SFMBT2Q5VUG0 894 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 TTBK2Q6IQ55 1244 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 NFRKBQ6P4R8 1299 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 EMBQ6PCB8 327 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 CACNA2D4Q7Z3S7 1137 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 CCDC65Q8IXS2 484 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SP8Q8IXZ3 490 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 GSPT2Q8IYD1 628 aaKnown RBP5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 CERS5Q8N5B7 392 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SCFD1Q8WVM8 642 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 MKL1Q969V6 931 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 CRACR2AQ9BSW2 395 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 FGFBP2Q9BYJ0 223 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 COA1Q9GZY4 146 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 EHD4Q9H223 541 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 GANQ9H2C0 597 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 DEF6Q9H4E7 631 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 GDF3Q9NR23 364 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 LRRC4BQ9NT99 713 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 TMEM51Q9NW97 253 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 STIM2Q9P246 746 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 LCMT1Q9UIC8 334 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SERPINB13Q9UIV8 391 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 PCDHA12Q9UN75 941 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 RRP15Q9Y3B9 282 aaKnown RBP5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 ATP6V0A2Q9Y487 856 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 PCDHGC5Q9Y5F6 944 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 ATP8B3O60423 1300 aa5.72□□□□□ -1.49
ATPAF1-212ENST00000542495 SIPA1L1O43166 1804 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 KIF13BQ9NQT8 1826 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 GRID2IPA4D2P6 1211 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 GOLGA6BA6NDN3 693 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 E9PMD0 336 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 MYO1CO00159 1063 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 TRAF5O00463 557 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 CES2O00748 559 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 NCK2O43639 380 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 PPFIA4O75335 1185 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 PLA2G4BP0C869 781 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 SOX11P35716 441 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 PAFAH1B1P43034 410 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 EPHB4P54760 987 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 GTF2IP78347 998 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 ATP2B2Q01814 1243 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 RASSF7Q02833 373 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 SPIRE1Q08AE8 756 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 SLC18A3Q16572 532 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 CCDC40Q4G0X9 1142 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 ARSHQ5FYA8 562 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 MEI1Q5TIA1 1274 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 ALS2CLQ60I27 953 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 FOXR1Q6PIV2 292 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 HHIPL2Q6UWX4 724 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 EPM2AIP1Q7L775 607 aaPredicted RBP5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 CLEC10AQ8IUN9 316 aa5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 RIN2Q8WYP3 895 aaPredicted RBP5.71□□□□□ -1.5
ATPAF1-212ENST00000542495 CCDC17Q96LX7 622 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms