RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 REEP2Q9BRK0 252 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 HEMGNQ9BXL5 484 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 MKRN1Q9UHC7 482 aaKnown RBP17.5■□□□□ 0.39
VARS2-212ENST00000542001 ATF5Q9Y2D1 282 aaPredicted RBP17.5■□□□□ 0.39
VARS2-212ENST00000542001 DAAM1Q9Y4D1 1078 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 H3BQF6 201 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 BCL9O00512 1426 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 KCNJ6P48051 423 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 HP1BP3Q5SSJ5 553 aaPredicted RBP17.5■□□□□ 0.39
VARS2-212ENST00000542001 PAXIP1Q6ZW49 1069 aaPredicted RBP17.5■□□□□ 0.39
VARS2-212ENST00000542001 PASD1Q8IV76 773 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 GJD4Q96KN9 370 aaPredicted RBP17.5■□□□□ 0.39
VARS2-212ENST00000542001 NACC1Q96RE7 527 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 PRDM4Q9UKN5 801 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 SNX12Q9UMY4 172 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 A0A1W2PQC6 194 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 NOP56O00567 594 aaKnown RBP17.5■□□□□ 0.39
VARS2-212ENST00000542001 PSMD2Q13200 908 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 B4GALNT4Q76KP1 1039 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 KCNK18Q7Z418 384 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 CNKSR1Q969H4 720 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 EIF2AK1Q9BQI3 630 aaKnown RBP17.5■□□□□ 0.39
VARS2-212ENST00000542001 FUT8Q9BYC5 575 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 PCDHAC2Q9Y5I4 1007 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 KRT15P19012 456 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 MXI1P50539 228 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 DRAP1Q14919 205 aaPredicted RBP17.49■□□□□ 0.39
VARS2-212ENST00000542001 PDXDC1Q6P996 788 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 SEPT14Q6ZU15 432 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 PACSIN1Q9BY11 444 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.49■□□□□ 0.39
VARS2-212ENST00000542001 CAMTA1Q9Y6Y1 1673 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
VARS2-212ENST00000542001 CD58P19256 250 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 FBXL16Q8N461 479 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 DEPTORQ8TB45 409 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 TACO1Q9BSH4 297 aaKnown RBP17.49■□□□□ 0.39
VARS2-212ENST00000542001 CEP72Q9P209 647 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 PLAAQ9Y263 795 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.49■□□□□ 0.39
VARS2-212ENST00000542001 SPATA31A5Q5VU36 1347 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 SPATA31A7Q8IWB4 1347 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 FERP16591 822 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 CARSP49589 748 aaKnown RBP17.49■□□□□ 0.39
VARS2-212ENST00000542001 ANKRD35Q8N283 1001 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 CLEC11AQ9Y240 323 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 STK38LQ9Y2H1 464 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 TNS2Q63HR2 1409 aa17.49■□□□□ 0.39
VARS2-212ENST00000542001 ZSCAN5CA6NGD5 496 aaPredicted RBP17.48■□□□□ 0.39
VARS2-212ENST00000542001 CCDC63Q8NA47 563 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 PPP1R14CQ8TAE6 165 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 HAUS1Q96CS2 278 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 IQCDQ96DY2 449 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 C7orf25Q9BPX7 421 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 A0A087X0T9 212 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 FAM228BP0C875 321 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 VPS37BQ9H9H4 285 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 EXOC7Q9UPT5 735 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 PDE4DIPQ5VU43 2346 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 UBR1Q8IWV7 1749 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 GPR75-ASB3A0A0A6YYF3 556 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 GOLGA8KD6RF30 607 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 ACSL3O95573 720 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 ECE1P42892 770 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 GUCY1A3Q02108 690 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 ZFPM1Q8IX07 1006 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 HDAC7Q8WUI4 952 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 RAB17Q9H0T7 212 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 NKIRAS1Q9NYS0 192 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 CEP83Q9Y592 693 aa17.48■□□□□ 0.39
VARS2-212ENST00000542001 NEBLO76041 1014 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 CASP4P49662 377 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 PSMC6P62333 389 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 HERVK_113P62684 666 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 DYNLT1P63172 113 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 PPP2R5DQ14738 602 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 BSPRYQ5W0U4 402 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 PPM1EQ8WY54 764 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 MASTLQ96GX5 879 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 IQCGQ9H095 443 aaKnown RBP17.47■□□□□ 0.39
VARS2-212ENST00000542001 LRRIQ3A6PVS8 624 aaPredicted RBP17.47■□□□□ 0.39
VARS2-212ENST00000542001 DAPK3O43293 454 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 DMP1Q13316 513 aaPredicted RBP17.47■□□□□ 0.39
VARS2-212ENST00000542001 PADI6Q6TGC4 694 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 RTFDC1Q9BY42 306 aaPredicted RBP17.47■□□□□ 0.39
VARS2-212ENST00000542001 C1orf112Q9NSG2 853 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 KBTBD4Q9NVX7 518 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.47■□□□□ 0.39
VARS2-212ENST00000542001 GOLGA8SH3BPF8 625 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 NR1D1P20393 614 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 MARK3P27448 753 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 PDE6CP51160 858 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 MTM1Q13496 603 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 SHROOM1Q2M3G4 852 aaPredicted RBP17.47■□□□□ 0.39
VARS2-212ENST00000542001 KIAA0895Q8NCT3 520 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 POC1B-GALNT4F8VUJ3 575 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 POLGP54098 1239 aaPredicted RBP17.47■□□□□ 0.39
VARS2-212ENST00000542001 EPC2Q52LR7 807 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 PPP1R21Q6ZMI0 780 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 CYFIP1Q7L576 1253 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms