RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 LRP2BPQ9P2M1 347 aa10.32□□□□□ -0.76
CTNNA1-243ENST00000540387 A0A1B0GUL6 1792 aa10.32□□□□□ -0.76
CTNNA1-243ENST00000540387 SH2B2O14492 632 aaPredicted RBP10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 ACTN4O43707 911 aaKnown RBP10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 WFS1O76024 890 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 GJA8P48165 433 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 ZNF131P52739 623 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 CYP27A1Q02318 531 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 MCMDC2Q4G0Z9 681 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 RAB11FIP4Q86YS3 637 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 FBF1Q8TES7 1133 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 OSBP2Q969R2 916 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 SLC35B4Q969S0 331 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 ELAC2Q9BQ52 826 aaKnown RBP10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 RHBDL2Q9NX52 303 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 GMEB1Q9Y692 573 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 AKAP11Q9UKA4 1901 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 TMEM221A6NGB7 291 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 PPP1R3GB7ZBB8 358 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 BAG3O95817 575 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 IL1R1P14778 569 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 GSTT1P30711 240 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 CTNNA1P35221 906 aaKnown RBP10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 ADD2P35612 726 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 PEX5P50542 639 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 UBXN1Q04323 297 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 CENPTQ96BT3 561 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 MS4A14Q96JA4 679 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 EYA3Q99504 573 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 RTFDC1Q9BY42 306 aaPredicted RBP10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 PUS7LQ9H0K6 701 aaKnown RBP10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 SAMD15Q9P1V8 674 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 GGT7Q9UJ14 662 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 BCS1LQ9Y276 419 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 MYH7BA7E2Y1 1941 aa10.31□□□□□ -0.76
CTNNA1-243ENST00000540387 PALM3A6NDB9 673 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 CPLX1O14810 134 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 ACADSP16219 412 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 PDE6AP16499 860 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 GBP1P32455 592 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 RAD23BP54727 409 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 DPYDQ12882 1025 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 IMMTQ16891 758 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 GALNTL6Q49A17 601 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 SESTD1Q86VW0 696 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 LRRC34Q8IZ02 419 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 STK11IPQ8N1F8 1099 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 MAGEB6Q8N7X4 407 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 UCMAQ8WVF2 138 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 IWS1Q96ST2 819 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 FHDC1Q9C0D6 1143 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.3□□□□□ -0.763e-7■□□□□ 10.9
CTNNA1-243ENST00000540387 COA1Q9GZY4 146 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 RAB17Q9H0T7 212 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 DBNDD1Q9H9R9 158 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 MLXIPQ9HAP2 919 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 LRWD1Q9UFC0 647 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 CTNND2Q9UQB3 1225 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 DUOX1Q9NRD9 1551 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 ZNF532Q9HCE3 1301 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 ARAP2Q8WZ64 1704 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 MYH1P12882 1939 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 G3V3G9 751 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 NCK2O43639 380 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 USO1O60763 962 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 MOCS3O95396 460 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 ZFYP08048 801 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 GSTA2P09210 222 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 PRDX5P30044 214 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 COPS2P61201 443 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 USP46P62068 366 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 CCDC15Q0P6D6 951 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 PLS1Q14651 629 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 MEA1Q16626 185 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 AOC3Q16853 763 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 DCAF8Q5TAQ9 597 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 KANK3Q6NY19 840 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 RNF168Q8IYW5 571 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 CNOT10Q9H9A5 744 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 NHEJ1Q9H9Q4 299 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 KCNQ5Q9NR82 932 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 SPATA7Q9P0W8 599 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 TSKSQ9UJT2 592 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 HPS5Q9UPZ3 1129 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 SNED1Q8TER0 1413 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 LRRC37AA6NMS7 1700 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 GOLGA8BA8MQT2 603 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 E7ENQ6 273 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 PFDN1O60925 122 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 SHBGP04278 402 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 CYP11B2P19099 503 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 CALB2P22676 271 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 CASP1P29466 404 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 GTF2IP78347 998 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 GRIK5Q16478 980 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 KRT40Q6A162 431 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 IRGCQ6NXR0 463 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 RTKN2Q8IZC4 609 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 SLC17A8Q8NDX2 589 aa10.3□□□□□ -0.76
CTNNA1-243ENST00000540387 APPBP2Q92624 585 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms