RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 PCDHB12Q9Y5F1 795 aa9.22□□□□□ -0.93
CHFR-211ENST00000535897 TRPV2Q9Y5S1 764 aa9.22□□□□□ -0.93
CHFR-211ENST00000535897 LOXHD1Q8IVV2 1947 aa9.22□□□□□ -0.93
CHFR-211ENST00000535897 USP34Q70CQ2 3546 aa9.22□□□□□ -0.93
CHFR-211ENST00000535897 DENND3A2RUS2 1198 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 LOC730098B7Z3J9 87 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 PER2O15055 1255 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 ST18O60284 1047 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 GLP2RO95838 553 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 SRGAP2BP0DMP2 458 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 ITGB5P18084 799 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 KRT76Q01546 638 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 NFX1Q12986 1120 aaKnown RBP9.21□□□□□ -0.94
CHFR-211ENST00000535897 AAMPQ13685 434 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 UBE2SQ16763 222 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 TMEM266Q2M3C6 531 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 RTN4RL1Q86UN2 441 aaPredicted RBP9.21□□□□□ -0.94
CHFR-211ENST00000535897 THNSL1Q8IYQ7 743 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 ZNF654Q8IZM8 581 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 CMTR1Q8N1G2 835 aaKnown RBP9.21□□□□□ -0.94
CHFR-211ENST00000535897 TRAPPC12Q8WVT3 735 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 RUFY2Q8WXA3 655 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 NEK1Q96PY6 1258 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 SDF4Q9BRK5 362 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 PHF7Q9BWX1 381 aaPredicted RBP9.21□□□□□ -0.94
CHFR-211ENST00000535897 SPZ1Q9BXG8 430 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 CELF4Q9BZC1 486 aaKnown RBP9.21□□□□□ -0.94
CHFR-211ENST00000535897 TLR9Q9NR96 1032 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 AAASQ9NRG9 546 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 FAM86C1Q9NVL1 165 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 PCDHB7Q9Y5E2 793 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 SQORQ9Y6N5 450 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 IGSF9BQ9UPX0 1349 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 KMT2EQ8IZD2 1858 aa9.21□□□□□ -0.94
CHFR-211ENST00000535897 CFAP54Q96N23 3096 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 hCG_1642624A0A1W2PR95 340 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 CCDC69A6NI79 296 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 TBKBP1A7MCY6 615 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 DDAH1O94760 285 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 PLEKHA8P1O95397 391 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 IGHDP01880 384 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 SP100P23497 879 aaPredicted RBP9.2□□□□□ -0.94
CHFR-211ENST00000535897 RBM10P98175 930 aaKnown RBP9.2□□□□□ -0.94
CHFR-211ENST00000535897 PTH1RQ03431 593 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 SIGLEC14Q08ET2 396 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 PLCB4Q15147 1175 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 CASC1Q6TDU7 716 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 HEATR3Q7Z4Q2 680 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 ATOH1Q92858 354 aaPredicted RBP9.2□□□□□ -0.94
CHFR-211ENST00000535897 LZTS2Q9BRK4 669 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 APOL5Q9BWW9 433 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 JADE2Q9NQC1 790 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 TSHZ2Q9NRE2 1034 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 RNF216Q9NWF9 866 aaPredicted RBP9.2□□□□□ -0.94
CHFR-211ENST00000535897 SLC9A2Q9UBY0 812 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 PCDHA2Q9Y5H9 948 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 TAF6LQ9Y6J9 622 aa9.2□□□□□ -0.94
CHFR-211ENST00000535897 SPTBN4Q9H254 2564 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 CACNA1HO95180 2353 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 FSD2A1L4K1 749 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 BACH1O14867 736 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 MAFGO15525 162 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 GFRA3O60609 400 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 RPS6KA5O75582 802 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 FGF18O76093 207 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 RXRAP19793 462 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 SARSP49591 514 aaKnown RBP9.19□□□□□ -0.94
CHFR-211ENST00000535897 GNAQP50148 359 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 STAT5BP51692 787 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 VCPP55072 806 aaKnown RBP9.19□□□□□ -0.94
CHFR-211ENST00000535897 ANTXR2P58335 489 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 ACTR2P61160 394 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 UBE3AQ05086 875 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 TCF15Q12870 199 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 CBX2Q14781 532 aaPredicted RBP9.19□□□□□ -0.94
CHFR-211ENST00000535897 PTPN21Q16825 1174 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 LLGL2Q6P1M3 1020 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 CRIPAKQ8N1N5 446 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 CCDC82Q8N4S0 544 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 IGDCC4Q8TDY8 1250 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 PCYT2Q99447 389 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 MAP3K14Q99558 947 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 ENTPD7Q9NQZ7 604 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 KCNH7Q9NS40 1196 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 TMEM260Q9NX78 707 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 PCDHA6Q9UN73 950 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 PCDHA8Q9Y5H6 950 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 UBIAD1Q9Y5Z9 338 aa9.19□□□□□ -0.94
CHFR-211ENST00000535897 SMIM35A0A1B0GVV1 85 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 DDX39AO00148 427 aaKnown RBP9.18□□□□□ -0.94
CHFR-211ENST00000535897 PRC1O43663 620 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 ATF7P17544 494 aaPredicted RBP9.18□□□□□ -0.94
CHFR-211ENST00000535897 SMARCA1P28370 1054 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 CA8P35219 290 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 TECP42680 631 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 ERVFC1P60507 584 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 APOBRQ0VD83 1088 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 DUSP6Q16828 381 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 FNDC1Q4ZHG4 1894 aaPredicted RBP9.18□□□□□ -0.94
CHFR-211ENST00000535897 FAM102BQ5T8I3 360 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms