RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 CHRNA2Q15822 529 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 ERCC6LQ2NKX8 1250 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 FNDC3BQ53EP0 1204 aaKnown RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 CCDC93Q567U6 631 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 HSP90AB3PQ58FF7 597 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 SLC35F1Q5T1Q4 408 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 CCDC183Q5T5S1 534 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 ZKSCAN2Q63HK3 967 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 RSPO2Q6UXX9 243 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 BRAPQ7Z569 592 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 DDX53Q86TM3 631 aaKnown RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 FAM177A1Q8N128 213 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 NLGN1Q8N2Q7 840 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 TMEM57Q8N5G2 664 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 NPLOC4Q8TAT6 608 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 LINC01599Q8WXQ3 324 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 KAT2BQ92831 832 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 ERO1AQ96HE7 468 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 FAXDC2Q96IV6 333 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 EIF3CQ99613 913 aaKnown RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 AP5M1Q9H0R1 490 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 SLC6A17Q9H1V8 727 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 SLC52A2Q9HAB3 445 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 MED4Q9NPJ6 270 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 RAI14Q9P0K7 980 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 TMEFF2Q9UIK5 374 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 CTNND2Q9UQB3 1225 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 NUB1Q9Y5A7 615 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 PCDHA8Q9Y5H6 950 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 OAS3Q9Y6K5 1087 aaKnown RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 DNMT1P26358 1616 aaKnown RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 PRDM15P57071 1507 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 ASXL1Q8IXJ9 1541 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 DISP1Q96F81 1524 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 NOS1P29475 1434 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 PPIP5K1Q6PFW1 1433 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 SPAG9O60271 1321 aaKnown RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 UNC13AQ9UPW8 1703 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 NPHP1O15259 732 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 RPS6KA5O75582 802 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 SLU7O95391 586 aaKnown RBP3.68□□□□□ -1.82
CSDE1-216ENST00000534389 HPXP02790 462 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 SOD2P04179 222 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 MYCLP1P12525 358 aaPredicted RBP3.68□□□□□ -1.82
CSDE1-216ENST00000534389 KRT15P19012 456 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 MCCP23508 829 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 FPR2P25090 351 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 OAS2P29728 719 aaKnown RBP3.68□□□□□ -1.82
CSDE1-216ENST00000534389 IGFALSP35858 605 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 TDO2P48775 406 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 CRY1Q16526 586 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 INF2Q27J81 1249 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 CFAP100Q494V2 611 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 PLEKHO1Q53GL0 409 aaPredicted RBP3.68□□□□□ -1.82
CSDE1-216ENST00000534389 ANKRD45Q5TZF3 282 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 STYK1Q6J9G0 422 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 KCNV1Q6PIU1 500 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 LBX2Q6XYB7 198 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 MMS22LQ6ZRQ5 1243 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 CCDC91Q7Z6B0 441 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 FILIP1Q7Z7B0 1213 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 SLCO6A1Q86UG4 719 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 ZSWIM9Q86XI8 627 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 PLA2G4DQ86XP0 818 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 DCP2Q8IU60 420 aaKnown RBP3.68□□□□□ -1.82
CSDE1-216ENST00000534389 CCDC103Q8IW40 242 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 WDR63Q8IWG1 891 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 AHI1Q8N157 1196 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 RCBTB1Q8NDN9 531 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 GOLGA5Q8TBA6 731 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 OTUD7AQ8TE49 926 aaPredicted RBP3.68□□□□□ -1.82
CSDE1-216ENST00000534389 SSH1Q8WYL5 1049 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 KISS1RQ969F8 398 aaPredicted RBP3.68□□□□□ -1.82
CSDE1-216ENST00000534389 MFSD3Q96ES6 412 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 TMX3Q96JJ7 454 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 RNF32Q9H0A6 362 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 EPB41L1Q9H4G0 881 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 L2HGDHQ9H9P8 463 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 CABP5Q9NP86 173 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 IFT57Q9NWB7 429 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.68□□□□□ -1.821e-9■■■■■ 32.7
CSDE1-216ENST00000534389 ORC3Q9UBD5 711 aaPredicted RBP3.68□□□□□ -1.82
CSDE1-216ENST00000534389 MAGEC2Q9UBF1 373 aaPredicted RBP3.68□□□□□ -1.82
CSDE1-216ENST00000534389 CNPY2Q9Y2B0 182 aa3.68□□□□□ -1.82
CSDE1-216ENST00000534389 CLTCL1P53675 1640 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 KLHL33A6NCF5 533 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 OR14I1A6ND48 311 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 F8W031 263 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-216ENST00000534389 H7BY64 318 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 DNAJC6O75061 913 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 KRT37O76014 449 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 RASGRP1O95267 797 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 ASLP04424 464 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 NTRK1P04629 796 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 PNLIPP16233 465 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 SDHBP21912 280 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 ACTN2P35609 894 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 CCZ1BP86790 482 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms