RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 EIF2AK2P19525 551 aaKnown RBP12.38□□□□□ -0.43
CSDE1-215ENST00000533818 TDO2P48775 406 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 KRT17Q04695 432 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 USH1GQ495M9 461 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 TAF2Q6P1X5 1199 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 KCNV1Q6PIU1 500 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 TMC5Q6UXY8 1006 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 SLC44A3Q8N4M1 653 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 GPR152Q8TDT2 470 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 LMBR1Q8WVP7 490 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 FOXQ1Q9C009 403 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 IL1RAPL2Q9NP60 686 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 ARHGEF3Q9NR81 526 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 COL20A1Q9P218 1284 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 HCSTQ9UBK5 93 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 CNOT1A5YKK6 2376 aaKnown RBP12.38□□□□□ -0.43
CSDE1-215ENST00000533818 MYH7BA7E2Y1 1941 aa12.38□□□□□ -0.43
CSDE1-215ENST00000533818 FRMPD2Q68DX3 1309 aaPredicted RBP12.37□□□□□ -0.43
CSDE1-215ENST00000533818 WDR19Q8NEZ3 1342 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 C2orf71A6NGG8 1288 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 SRRM3A6NNA2 597 aaPredicted RBP12.37□□□□□ -0.43
CSDE1-215ENST00000533818 NR3C2P08235 984 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 SRFP11831 508 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 LAG3P18627 525 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 SP2Q02086 613 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 SMC1AQ14683 1233 aaKnown RBP12.37□□□□□ -0.43
CSDE1-215ENST00000533818 IL31Q6EBC2 164 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 DCLRE1AQ6PJP8 1040 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 ERC1Q8IUD2 1116 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 USP26Q9BXU7 913 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 BCO2Q9BYV7 579 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 RAB23Q9ULC3 237 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 CDY2AQ9Y6F7 541 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 IGF2RP11717 2491 aa12.37□□□□□ -0.43
CSDE1-215ENST00000533818 TAF4O00268 1085 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 GDF9O60383 454 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 NMT2O60551 498 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 APPP05067 770 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 CA8P35219 290 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 SLFN5Q08AF3 891 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 FAM102BQ5T8I3 360 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 ZSCAN25Q6NSZ9 544 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 FEZF2Q8TBJ5 459 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 DNAJB3Q8WWF6 145 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 MAF1Q9H063 256 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 BOLA2Q9H3K6 86 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 IL17RBQ9NRM6 502 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 PADI3Q9ULW8 664 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 NRCAMQ92823 1304 aa12.36□□□□□ -0.43
CSDE1-215ENST00000533818 NOP56O00567 594 aaKnown RBP12.35□□□□□ -0.43
CSDE1-215ENST00000533818 LRP3O75074 770 aa12.35□□□□□ -0.43
CSDE1-215ENST00000533818 SLC3A2P08195 630 aaKnown RBP12.35□□□□□ -0.43
CSDE1-215ENST00000533818 UBA1P22314 1058 aaKnown RBP12.35□□□□□ -0.43
CSDE1-215ENST00000533818 SARSP49591 514 aaKnown RBP12.35□□□□□ -0.43
CSDE1-215ENST00000533818 PTPN14Q15678 1187 aa12.35□□□□□ -0.43
CSDE1-215ENST00000533818 LPAL2Q16609 132 aa12.35□□□□□ -0.43
CSDE1-215ENST00000533818 LAIR1Q6GTX8 287 aa12.35□□□□□ -0.43
CSDE1-215ENST00000533818 PRR23CQ6ZRP0 262 aa12.35□□□□□ -0.43
CSDE1-215ENST00000533818 GPR149Q86SP6 731 aa12.35□□□□□ -0.43
CSDE1-215ENST00000533818 CABP7Q86V35 215 aa12.35□□□□□ -0.43
CSDE1-215ENST00000533818 TMEM87AQ8NBN3 555 aa12.35□□□□□ -0.43
CSDE1-215ENST00000533818 CWH43Q9H720 699 aa12.35□□□□□ -0.43
CSDE1-215ENST00000533818 EPB41L4AQ9HCS5 686 aaPredicted RBP12.35□□□□□ -0.43
CSDE1-215ENST00000533818 SEMA4GQ9NTN9 838 aa12.35□□□□□ -0.43
CSDE1-215ENST00000533818 EXOC6BQ9Y2D4 811 aa12.35□□□□□ -0.43
CSDE1-215ENST00000533818 CCDC171Q6TFL3 1326 aa12.35□□□□□ -0.43
CSDE1-215ENST00000533818 BPTFQ12830 3046 aa12.35□□□□□ -0.43
CSDE1-215ENST00000533818 NAV2Q8IVL1 2488 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 TMEM8BA6NDV4 472 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 TSPY2A6NKD2 308 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 CXCL14O95715 111 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 RETP07949 1114 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 IFIT2P09913 472 aaKnown RBP12.34□□□□□ -0.43
CSDE1-215ENST00000533818 TGFB3P10600 412 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 MYCLP12524 364 aaPredicted RBP12.34□□□□□ -0.43
CSDE1-215ENST00000533818 EPCAMP16422 314 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 MRPS6P82932 125 aaKnown RBP12.34□□□□□ -0.43
CSDE1-215ENST00000533818 KCNT2Q6UVM3 1135 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 TRIM50Q86XT4 487 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 NELL1Q92832 810 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 SHDQ96IW2 340 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 BCL11AQ9H165 835 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 C1orf115Q9H7X2 142 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 PXMP2Q9NR77 195 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 ZNF215Q9UL58 517 aaPredicted RBP12.34□□□□□ -0.43
CSDE1-215ENST00000533818 SQORQ9Y6N5 450 aa12.34□□□□□ -0.43
CSDE1-215ENST00000533818 HELZ2Q9BYK8 2649 aaKnown RBP12.34□□□□□ -0.43
CSDE1-215ENST00000533818 SPDYE4A6NLX3 237 aa12.33□□□□□ -0.44
CSDE1-215ENST00000533818 CT47B1P0C2W7 299 aaPredicted RBP12.33□□□□□ -0.44
CSDE1-215ENST00000533818 PDE4AP27815 886 aa12.33□□□□□ -0.44
CSDE1-215ENST00000533818 GBP2P32456 591 aaPredicted RBP12.33□□□□□ -0.44
CSDE1-215ENST00000533818 PPM1AP35813 382 aa12.33□□□□□ -0.44
CSDE1-215ENST00000533818 STARD6P59095 220 aa12.33□□□□□ -0.44
CSDE1-215ENST00000533818 PAK2Q13177 524 aa12.33□□□□□ -0.44
CSDE1-215ENST00000533818 BMS1Q14692 1282 aaKnown RBP12.33□□□□□ -0.44
CSDE1-215ENST00000533818 CSRP2Q16527 193 aa12.33□□□□□ -0.44
CSDE1-215ENST00000533818 LETM2Q2VYF4 491 aa12.33□□□□□ -0.44
CSDE1-215ENST00000533818 UTP14CQ5TAP6 766 aaKnown RBP12.33□□□□□ -0.44
CSDE1-215ENST00000533818 MCF2L2Q86YR7 1114 aa12.33□□□□□ -0.44
CSDE1-215ENST00000533818 GLG1Q92896 1179 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms