RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 PHIPQ8WWQ0 1821 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 USP14P54578 494 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 COG2Q14746 738 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 EPHA7Q15375 998 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 SNRNP48Q6IEG0 339 aaKnown RBP13.17□□□□□ -0.3
CLP1-205ENST00000533682 RRAGAQ7L523 313 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 APOBEC3FQ8IUX4 373 aaKnown RBP13.17□□□□□ -0.3
CLP1-205ENST00000533682 TRIM59Q8IWR1 403 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 GPC2Q8N158 579 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 NUP58Q9BVL2 599 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 FHDC1Q9C0D6 1143 aaPredicted RBP13.17□□□□□ -0.3
CLP1-205ENST00000533682 EPC1Q9H2F5 836 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 AGO4Q9HCK5 861 aaKnown RBP13.17□□□□□ -0.3
CLP1-205ENST00000533682 RNF146Q9NTX7 359 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 GUCA1BQ9UMX6 200 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 UBIAD1Q9Y5Z9 338 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 SBF1O95248 1867 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 TESPA1A2RU30 521 aaPredicted RBP13.17□□□□□ -0.3
CLP1-205ENST00000533682 ZNF263O14978 683 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 TUBB4AP04350 444 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 LMNB1P20700 586 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 PLS1Q14651 629 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 TMEM132BQ14DG7 1078 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 PCNX4Q63HM2 1172 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 MIER3Q7Z3K6 550 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 SLC35F6Q8N357 371 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 RETREG2Q8NC44 543 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 ERO1AQ96HE7 468 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 FIZ1Q96SL8 496 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 RIT2Q99578 217 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 LACRTQ9GZZ8 138 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 PXMP2Q9NR77 195 aa13.17□□□□□ -0.3
CLP1-205ENST00000533682 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLP1-205ENST00000533682 ASTN1O14525 1302 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 DOCK5Q9H7D0 1870 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 LRRC53A6NM62 1247 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 TGFB1I1O43294 461 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 SORBS3O60504 671 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 AKAP3O75969 853 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 NOL4O94818 638 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 FAM13AO94988 1023 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 MAP3K9P80192 1104 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 UGCGQ16739 394 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 REPS2Q8NFH8 660 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 NACC1Q96RE7 527 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 PDCD2LQ9BRP1 358 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 JADE2Q9NQC1 790 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 ARHGAP20Q9P2F6 1191 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 ZNF214Q9UL59 606 aaPredicted RBP13.16□□□□□ -0.3
CLP1-205ENST00000533682 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 KIAA1217Q5T5P2 1943 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 MYH10P35580 1976 aa13.16□□□□□ -0.3
CLP1-205ENST00000533682 KIF5CO60282 957 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 USP2O75604 605 aaPredicted RBP13.15□□□□□ -0.3
CLP1-205ENST00000533682 ARHGEF16Q5VV41 709 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 DAW1Q8N136 415 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 BAP1Q92560 729 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 CEP63Q96MT8 703 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 ZSWIM4Q9H7M6 989 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 PLAGL2Q9UPG8 496 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 TRAF3IP3Q9Y228 551 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 A0A1W2PQJ5 194 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 ADM5C9JUS6 153 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 CETN3O15182 167 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 CCNE2O96020 404 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 BCRP11274 1271 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 GHRHRQ02643 423 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 KCNH2Q12809 1159 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 FIGNQ5HY92 759 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 FOXR2Q6PJQ5 311 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 PARVGQ9HBI0 331 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 AS3MTQ9HBK9 375 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 GINM1Q9NU53 330 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
CLP1-205ENST00000533682 CCDC66A2RUB6 948 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 NR3C1P04150 777 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 ACTN1P12814 892 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 DSG3P32926 999 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 EDRF1Q3B7T1 1238 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.14□□□□□ -0.31
CLP1-205ENST00000533682 ZC3H3Q8IXZ2 948 aaKnown RBP13.14□□□□□ -0.31
CLP1-205ENST00000533682 ZNF397Q8NF99 534 aaPredicted RBP13.14□□□□□ -0.31
CLP1-205ENST00000533682 ZNHIT6Q9NWK9 470 aaKnown RBP13.14□□□□□ -0.31
CLP1-205ENST00000533682 AFG3L2Q9Y4W6 797 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 MRFAP1Q9Y605 127 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 ZMYM2Q9UBW7 1377 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 PDXKO00764 312 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 HIP1RO75146 1068 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 POLR2FP61218 127 aaKnown RBP13.14□□□□□ -0.31
CLP1-205ENST00000533682 MAPK7Q13164 816 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 VGLL4Q14135 290 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 ODR4Q5SWX8 454 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 TREML2Q5T2D2 321 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 PADI6Q6TGC4 694 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 NEK11Q8NG66 645 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 LSM14BQ9BX40 385 aaKnown RBP13.14□□□□□ -0.31
CLP1-205ENST00000533682 OLFML3Q9NRN5 406 aa13.14□□□□□ -0.31
CLP1-205ENST00000533682 DICER1Q9UPY3 1922 aaKnown RBP13.14□□□□□ -0.31
CLP1-205ENST00000533682 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms