RNA–Protein interactions for RNA: ENST00000532147.1

NFRKB-210, Transcript of nuclear factor related to kappaB binding protein, human

TSL 3

Gene NFRKB, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFRKB-210	ENST00000532147	FOXP1	Q9H334	677 aa	Predicted RBP	13.64	□□□□□ -0.23
NFRKB-210	ENST00000532147	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.64	□□□□□ -0.23
NFRKB-210	ENST00000532147	GABBR1	Q9UBS5	961 aa		13.64	□□□□□ -0.23
NFRKB-210	ENST00000532147	PCDHA2	Q9Y5H9	948 aa		13.64	□□□□□ -0.23
NFRKB-210	ENST00000532147	TET1	Q8NFU7	2136 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	SCN5A	Q14524	2016 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	KAT6A	Q92794	2004 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	BAIAP3	O94812	1187 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	IGBP1	P78318	339 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	PPP2R5C	Q13362	524 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	ZNF484	Q5JVG2	852 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	CNKSR3	Q6P9H4	555 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	MIER3	Q7Z3K6	550 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	RSPH3	Q86UC2	560 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	POTED	Q86YR6	584 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	BBX	Q8WY36	941 aa	Predicted RBP	13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	HAS1	Q92839	578 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	VAV3	Q9UKW4	847 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	KIF3A	Q9Y496	699 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	SAMM50	Q9Y512	469 aa		13.63	□□□□□ -0.23
NFRKB-210	ENST00000532147	SMIM35	A0A1B0GVV1	85 aa		13.62	□□□□□ -0.23
NFRKB-210	ENST00000532147	ZBTB42	B2RXF5	422 aa		13.62	□□□□□ -0.23
NFRKB-210	ENST00000532147	WNT7A	O00755	349 aa		13.62	□□□□□ -0.23
NFRKB-210	ENST00000532147	CHMP2A	O43633	222 aa		13.62	□□□□□ -0.23
NFRKB-210	ENST00000532147	ZNF862	O60290	1169 aa		13.62	□□□□□ -0.23
NFRKB-210	ENST00000532147	MGAT3	Q09327	533 aa		13.62	□□□□□ -0.23
NFRKB-210	ENST00000532147	SLFN12	Q8IYM2	578 aa		13.62	□□□□□ -0.23
NFRKB-210	ENST00000532147	TRAPPC12	Q8WVT3	735 aa		13.62	□□□□□ -0.23
NFRKB-210	ENST00000532147	CEP131	Q9UPN4	1083 aa		13.62	□□□□□ -0.23
NFRKB-210	ENST00000532147	SLC4A7	Q9Y6M7	1214 aa		13.62	□□□□□ -0.23
NFRKB-210	ENST00000532147	TMEM265	A0A087WTH1	108 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	EFCAB14	O75071	495 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	BAG4	O95429	457 aa	Known RBP	13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	CHRNA1	P02708	482 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	OAT	P04181	439 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	CTSH	P09668	335 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	U2AF2	P26368	475 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	SPIRE1	Q08AE8	756 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	ORC2	Q13416	577 aa	Predicted RBP	13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	UGCG	Q16739	394 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	TCTN1	Q2MV58	587 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	PLEKHG4	Q58EX7	1191 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	MTHFD1L	Q6UB35	978 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	CKAP2L	Q8IYA6	745 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	PHOSPHO2	Q8TCD6	241 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	DNAJB3	Q8WWF6	145 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	ZBTB10	Q96DT7	871 aa		13.61	□□□□□ -0.23
NFRKB-210	ENST00000532147	ZBBX	A8MT70	800 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	EML1	O00423	815 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	NEMF	O60524	1076 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	STBD1	O95210	358 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	KLRC1	P26715	233 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	TRAPPC10	P48553	1259 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	MRPS6	P82932	125 aa	Known RBP	13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	PRKCE	Q02156	737 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	MKRN4P	Q13434	485 aa	Predicted RBP	13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	CUL4A	Q13619	759 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	EPHA7	Q15375	998 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	CALCRL	Q16602	461 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	NOSTRIN	Q8IVI9	506 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	NME8	Q8N427	588 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	MTMR9	Q96QG7	549 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	SLC9A7	Q96T83	725 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	NRBP2	Q9NSY0	501 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	KDM3A	Q9Y4C1	1321 aa		13.6	□□□□□ -0.23
NFRKB-210	ENST00000532147	GRXCR1	A8MXD5	290 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	KIF28P	B7ZC32	967 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	MAGEB2	O15479	319 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	MARCH6	O60337	910 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	C22orf31	O95567	290 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	ATP2A2	P16615	1042 aa	Known RBP	13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	DNAJB2	P25686	324 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	GJB2	P29033	226 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	PSMC5	P62195	406 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	IKBKE	Q14164	716 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	TARBP2	Q15633	366 aa	Known RBP	13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	RAB30	Q15771	203 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	XKR3	Q5GH77	459 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	IER5	Q5VY09	327 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	LINC01465	Q8N7H1	131 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	DBF4B	Q8NFT6	615 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	SEPT8	Q92599	483 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	NIFK	Q9BYG3	293 aa	Known RBP	13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	PBX4	Q9BYU1	374 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	OSBPL7	Q9BZF2	842 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	TMEM60	Q9H2L4	133 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	SMC3	Q9UQE7	1217 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	CDY2A	Q9Y6F7	541 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	SQOR	Q9Y6N5	450 aa		13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	MYH9	P35579	1960 aa	Known RBP	13.59	□□□□□ -0.23
NFRKB-210	ENST00000532147	DKC1	O60832	514 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
NFRKB-210	ENST00000532147	P4HB	P07237	508 aa	Known RBP	13.58	□□□□□ -0.24
NFRKB-210	ENST00000532147	QARS	P47897	775 aa	Known RBP	13.58	□□□□□ -0.24
NFRKB-210	ENST00000532147	WDR5	P61964	334 aa	Known RBP	13.58	□□□□□ -0.24
NFRKB-210	ENST00000532147	FBXO47	Q5MNV8	452 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms