RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 RC3H1Q5TC82 1133 aaKnown RBP9.13□□□□□ -0.95
CTNND1-227ENST00000530748 ALS2CLQ60I27 953 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 KCTD16Q68DU8 428 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 DSTYKQ6XUX3 929 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 BZW1Q7L1Q6 419 aaKnown RBP9.13□□□□□ -0.95
CTNND1-227ENST00000530748 THEM5Q8N1Q8 247 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 ARHGEF40Q8TER5 1519 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 GOLGA8IPA6NC78 632 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 GOLGA8JA6NMD2 632 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 WDR64B1ANS9 1081 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 CD2BP2O95400 341 aaKnown RBP9.13□□□□□ -0.95
CTNND1-227ENST00000530748 MT-ND3P03897 115 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 SESN3P58005 492 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 PTPN21Q16825 1174 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 FAM83BQ5T0W9 1011 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 TBC1D10CQ8IV04 446 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 RHOT2Q8IXI1 618 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
CTNND1-227ENST00000530748 STRBPQ96SI9 672 aaKnown RBP9.13□□□□□ -0.95
CTNND1-227ENST00000530748 TLK1Q9UKI8 766 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 IQANK1A0A1B0GTG1 560 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 MTMR1Q13613 665 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 GRM4Q14833 912 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 KRT31Q15323 416 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 SEPT12Q8IYM1 358 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 RNF139Q8WU17 664 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 ATP6V1E2Q96A05 226 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 BPIFA3Q9BQP9 254 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 SPTLC3Q9NUV7 552 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 HMGB1P1B2RPK0 211 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-227ENST00000530748 MFAP3LO75121 409 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 SRGAP2CP0DJJ0 459 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 EIF2AK2P19525 551 aaKnown RBP9.13□□□□□ -0.95
CTNND1-227ENST00000530748 PSMA2P25787 234 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 RCAN1P53805 252 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 CUL1Q13616 776 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 KRT39Q6A163 491 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 ELMSAN1Q6PJG2 1045 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.13□□□□□ -0.95
CTNND1-227ENST00000530748 C7orf31Q8N865 590 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 BANK1Q8NDB2 785 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 PDZD8Q8NEN9 1154 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 ZWILCHQ9H900 591 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 MID2Q9UJV3 735 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 GNAT1P11488 350 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 TOB2Q14106 344 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-227ENST00000530748 RCN2Q14257 317 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 HLFQ16534 295 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 CYB5R4Q7L1T6 521 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 NOP9Q86U38 636 aaKnown RBP9.12□□□□□ -0.95
CTNND1-227ENST00000530748 ERICH1Q86X53 443 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 CHAMP1Q96JM3 812 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 MTRQ99707 1265 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 KIAA1586Q9HCI6 787 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 SLC8A2Q9UPR5 921 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 ORC6Q9Y5N6 252 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 MROH7-TTC4A0A0A0MT08 1334 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 ZNF335Q9H4Z2 1342 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-227ENST00000530748 GPC3P51654 580 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 EIF3BP55884 814 aaKnown RBP9.12□□□□□ -0.95
CTNND1-227ENST00000530748 RWDD2BP57060 319 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 STXBP2Q15833 593 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 EEPD1Q7L9B9 569 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 PCGF5Q86SE9 256 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 SLC10A4Q96EP9 437 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 HINFPQ9BQA5 517 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 CALN1Q9BXU9 219 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 ZMYND12Q9H0C1 365 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 MAGED2Q9UNF1 606 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-227ENST00000530748 SPATA31A3Q5VYP0 1347 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 PAMP19021 973 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 KIAA1841Q6NSI8 718 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 DHX38Q92620 1227 aaKnown RBP9.12□□□□□ -0.95
CTNND1-227ENST00000530748 EEF2KMTQ96G04 330 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 TOM1L1O75674 476 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 TJP3O95049 919 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 CXCR5P32302 372 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 PEX3P56589 373 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 KCNQ4P56696 695 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 DHX9Q08211 1270 aaKnown RBP9.12□□□□□ -0.95
CTNND1-227ENST00000530748 TRIP13Q15645 432 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-227ENST00000530748 CENPUQ71F23 418 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 PROM2Q8N271 834 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 TXLNGQ9NUQ3 528 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 PIM2Q9P1W9 311 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 THEGQ9P2T0 379 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 RNF17Q9BXT8 1623 aaKnown RBP9.12□□□□□ -0.95
CTNND1-227ENST00000530748 STMN1P16949 149 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 MCUQ8NE86 351 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 SPDL1Q96EA4 605 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 NUDCD1Q96RS6 583 aa9.12□□□□□ -0.95
CTNND1-227ENST00000530748 LRRD1A4D1F6 860 aa9.11□□□□□ -0.95
CTNND1-227ENST00000530748 SLC4A1P02730 911 aa9.11□□□□□ -0.95
CTNND1-227ENST00000530748 PPARGP37231 505 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-227ENST00000530748 CCT5P48643 541 aa9.11□□□□□ -0.95
CTNND1-227ENST00000530748 ATG16L1Q676U5 607 aa9.11□□□□□ -0.95
CTNND1-227ENST00000530748 KLC3Q6P597 504 aa9.11□□□□□ -0.95
CTNND1-227ENST00000530748 SIRT2Q8IXJ6 389 aa9.11□□□□□ -0.95
CTNND1-227ENST00000530748 TRIM15Q9C019 465 aa9.11□□□□□ -0.95
CTNND1-227ENST00000530748 HOXC10Q9NYD6 342 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms