RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 USH1GQ495M9 461 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 BRDTQ58F21 947 aaPredicted RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 NFRKBQ6P4R8 1299 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 MB21D2Q8IYB1 491 aaPredicted RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 TMEM199Q8N511 208 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 NCOA7Q8NI08 942 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 HERVK_113Q902F9 699 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 RNPC3Q96LT9 517 aaKnown RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 RMDN3Q96TC7 470 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 OCSTAMPQ9BR26 566 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 NOC4LQ9BVI4 516 aaKnown RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 LSG1Q9H089 658 aaKnown RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 TRPV6Q9H1D0 765 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 TTYH1Q9H313 450 aaPredicted RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 VAT1LQ9HCJ6 419 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 DDX41Q9UJV9 622 aaKnown RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 PNMA6FA0A0J9YX94 578 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 MEN1O00255 615 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 IFIT3O14879 490 aaKnown RBP6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 B4GALT4O60513 344 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 TGFB3P10600 412 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 CYP2C18P33260 490 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 PSMC6P62333 389 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 ARHGAP1Q07960 439 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 SART3Q15020 963 aaKnown RBP6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 PPP2R5BQ15173 497 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 BMP2KLQ5H9B9 411 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 ZNF365Q70YC5 407 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 SESTD1Q86VW0 696 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 TMTC2Q8N394 836 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 SLC17A8Q8NDX2 589 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 OR6J1Q8NGC5 347 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 KAT2BQ92831 832 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 COPS5Q92905 334 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 CDX2Q99626 313 aaPredicted RBP6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 PDCD2LQ9BRP1 358 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 HIPK3Q9H422 1215 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 IL23AQ9NPF7 189 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 TIMMDC1Q9NPL8 285 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 PXMP2Q9NR77 195 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 FKBPLQ9UIM3 349 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 GPSM3Q9Y4H4 160 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 PCDHA1Q9Y5I3 950 aa6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 RBM8AQ9Y5S9 174 aaKnown RBP6.9□□□□□ -1.3
CCDC90B-204ENST00000525504 CHD9Q3L8U1 2897 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 C2CD2LO14523 706 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 PPFIA4O75335 1185 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 GH1P01241 217 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 FGBP02675 491 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 BMP4P12644 408 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 RFC5P40937 340 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 LIFRP42702 1097 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 LAMC2Q13753 1193 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 WTAPQ15007 396 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 TSGA10IPQ3SY00 556 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 TMEM67Q5HYA8 995 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 ARHGEF16Q5VV41 709 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 PSRC1Q6PGN9 363 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 KCNV1Q6PIU1 500 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 SEPT14Q6ZU15 432 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 CATIPQ7Z7H3 387 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 RALYLQ86SE5 291 aaKnown RBP6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 RNF135Q8IUD6 432 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 RPUSD2Q8IZ73 545 aaKnown RBP6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 AFG1LQ8WV93 481 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 CTAGE1Q96RT6 745 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 PIGSQ96S52 555 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 LZTS2Q9BRK4 669 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 ESYT1Q9BSJ8 1104 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 SPZ1Q9BXG8 430 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 GRIP2Q9C0E4 1043 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 WNT8AQ9H1J5 351 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 LY9Q9HBG7 655 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 CYLDQ9NQC7 956 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 TRMT13Q9NUP7 481 aaKnown RBP6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 ATXN7L1Q9ULK2 861 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 UMODL1Q5DID0 1318 aa6.89□□□□□ -1.31
CCDC90B-204ENST00000525504 FRMPD4Q14CM0 1322 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 ERICH2A1L162 156 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 GCOM1H8Y6P7 765 aaPredicted RBP6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 HAS3O00219 553 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 PIK3CDO00329 1044 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 SH2B2O14492 632 aaPredicted RBP6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 SLC27A2O14975 620 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 DHX16O60231 1041 aaKnown RBP6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 DDAH1O94760 285 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 CFBP00751 764 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 MMP3P08254 477 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 MYL3P08590 195 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 POLR2MP0CAP2 368 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 ACRP10323 421 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 ARAFP10398 606 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 CYP2C9P11712 490 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 EIF2AK2P19525 551 aaKnown RBP6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 CASTP20810 708 aaKnown RBP6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 ICAM3P32942 547 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 KIF5BP33176 963 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 MCM5P33992 734 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 RFC2P35250 354 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms