RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 BPIFB4P59827 614 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 RC3H1Q5TC82 1133 aaKnown RBP11.3□□□□□ -0.6
CTSC-203ENST00000524463 SPON2Q9BUD6 331 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 DHX36Q9H2U1 1008 aaKnown RBP11.3□□□□□ -0.6
CTSC-203ENST00000524463 COG4Q9H9E3 785 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 MAN1B1Q9UKM7 699 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 EPN1Q9Y6I3 576 aaPredicted RBP11.3□□□□□ -0.6
CTSC-203ENST00000524463 BLMP54132 1417 aaPredicted RBP11.3□□□□□ -0.6
CTSC-203ENST00000524463 ARL13BQ3SXY8 428 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 MFSD14CQ5VZR4 134 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 SH3KBP1Q96B97 665 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 FAF2Q96CS3 445 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 EPB41L5Q9HCM4 733 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 TPX2Q9ULW0 747 aaKnown RBP11.3□□□□□ -0.6
CTSC-203ENST00000524463 SOWAHDA6NJG2 315 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 SRGAP2O75044 1071 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 MXI1P50539 228 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 DYDC2Q96IM9 177 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 MXD3Q9BW11 206 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 LSG1Q9H089 658 aaKnown RBP11.3□□□□□ -0.6
CTSC-203ENST00000524463 TMEM206Q9H813 350 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 SAMSN1Q9NSI8 373 aaKnown RBP11.3□□□□□ -0.6
CTSC-203ENST00000524463 PNMA6FA0A0J9YX94 578 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 ZBED1O96006 694 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 SERPIND1P05546 499 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 LCP1P13796 627 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 TSPY1Q01534 308 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 SH2D3AQ9BRG2 576 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 FSD1LQ9BXM9 530 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 PCDHA5Q9Y5H7 936 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 MAPKBP1O60336 1514 aa11.3□□□□□ -0.6
CTSC-203ENST00000524463 RNF135Q8IUD6 432 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 HIPK4Q8NE63 616 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 NCLNQ969V3 563 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 ATP10DQ9P241 1426 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 ZFYVE16Q7Z3T8 1539 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 CAPRIN1Q14444 709 aaKnown RBP11.29□□□□□ -0.6
CTSC-203ENST00000524463 LMBRD2Q68DH5 695 aaPredicted RBP11.29□□□□□ -0.6
CTSC-203ENST00000524463 ZNF302Q9NR11 478 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 PCSK1NQ9UHG2 260 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 DFFAO00273 331 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 PRPF4O43172 522 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTSC-203ENST00000524463 FAM133BQ5BKY9 247 aaKnown RBP11.29□□□□□ -0.6
CTSC-203ENST00000524463 EFCAB13Q8IY85 973 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTSC-203ENST00000524463 ZNF507Q8TCN5 953 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 MAML1Q92585 1016 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 COA1Q9GZY4 146 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 FBXL5Q9UKA1 691 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 TNPO2O14787 897 aaKnown RBP11.29□□□□□ -0.6
CTSC-203ENST00000524463 CIITAP33076 1130 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 TUBB2AQ13885 445 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 TAS2R42Q7RTR8 314 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 CDHR1Q96JP9 859 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 GBP5Q96PP8 586 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 TUBB2BQ9BVA1 445 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 HPCAL4Q9UM19 191 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 ECEL1O95672 775 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 TUBBP07437 444 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 DPCR1Q3MIW9 517 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 C11orf57Q6ZUT1 292 aaPredicted RBP11.29□□□□□ -0.6
CTSC-203ENST00000524463 PBXIP1Q96AQ6 731 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 SAAL1Q96ER3 474 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 ATP6V0A4Q9HBG4 840 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 VCX3AQ9NNX9 186 aa11.29□□□□□ -0.6
CTSC-203ENST00000524463 KLHL8Q9P2G9 620 aaPredicted RBP11.29□□□□□ -0.6
CTSC-203ENST00000524463 M0QYV0 167 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 CLDN3O15551 220 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 HUS1O60921 280 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 GNAT1P11488 350 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 GPC3P51654 580 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 LBRQ14739 615 aaKnown RBP11.28□□□□□ -0.6
CTSC-203ENST00000524463 RSBN1LQ6PCB5 846 aaPredicted RBP11.28□□□□□ -0.6
CTSC-203ENST00000524463 SCYL3Q8IZE3 742 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 HAUS8Q9BT25 410 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 HOMER3Q9NSC5 361 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 CLCA2Q9UQC9 943 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 CIAO1O76071 339 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 SYF2O95926 243 aaKnown RBP11.28□□□□□ -0.6
CTSC-203ENST00000524463 HMGCS2P54868 508 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 OCRLQ01968 901 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 DRP2Q13474 957 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 ZNF699Q32M78 642 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 LBHD1Q9BQE6 289 aaPredicted RBP11.28□□□□□ -0.6
CTSC-203ENST00000524463 RNF146Q9NTX7 359 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 GABBR1Q9UBS5 961 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.28□□□□□ -0.6
CTSC-203ENST00000524463 SH2B2O14492 632 aaPredicted RBP11.28□□□□□ -0.6
CTSC-203ENST00000524463 GCLMP48507 274 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 ZNF667Q5HYK9 610 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 FAM160B2Q86V87 743 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 FBXL13Q8NEE6 735 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 ARHGEF1Q92888 912 aaKnown RBP11.28□□□□□ -0.6
CTSC-203ENST00000524463 NR1H4Q96RI1 486 aaPredicted RBP11.28□□□□□ -0.6
CTSC-203ENST00000524463 MYOM2P54296 1465 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 EIF4A3P38919 411 aaKnown RBP11.28□□□□□ -0.6
CTSC-203ENST00000524463 AP1B1Q10567 949 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 WHAMMP3Q1A5X7 153 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 ATXN7L3BQ96GX2 97 aa11.28□□□□□ -0.6
CTSC-203ENST00000524463 ASMTLO95671 621 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms