RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 PLCB4Q15147 1175 aa18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 ZNF174Q15697 407 aa18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 TRIM71Q2Q1W2 868 aaKnown RBP18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 FAM109BQ6ICB4 259 aaPredicted RBP18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 POTEBQ6S5H4 581 aa18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 OTOP2Q7RTS6 562 aa18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 BRAPQ7Z569 592 aa18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 CKAP2LQ8IYA6 745 aa18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 HERVK_113Q902F9 699 aa18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 GJA10Q969M2 543 aa18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 FAM167AQ96KS9 214 aa18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 FOXD4L1Q9NU39 408 aa18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 SETD4Q9NVD3 440 aa18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 CXXC1Q9P0U4 656 aaPredicted RBP18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 PCDHA12Q9UN75 941 aa18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 PTPRSQ13332 1948 aa18.68■□□□□ 0.58
CSGALNACT1-216ENST00000524213 VPS37CA5D8V6 355 aaPredicted RBP18.67■□□□□ 0.58
CSGALNACT1-216ENST00000524213 TREHO43280 583 aa18.67■□□□□ 0.58
CSGALNACT1-216ENST00000524213 CKBP12277 381 aa18.67■□□□□ 0.58
CSGALNACT1-216ENST00000524213 RFC2P35250 354 aa18.67■□□□□ 0.58
CSGALNACT1-216ENST00000524213 SMAD3P84022 425 aaKnown RBP18.67■□□□□ 0.58
CSGALNACT1-216ENST00000524213 GRIK4Q16099 956 aa18.67■□□□□ 0.58
CSGALNACT1-216ENST00000524213 SERINC5Q86VE9 423 aa18.67■□□□□ 0.58
CSGALNACT1-216ENST00000524213 DEFB123Q8N688 67 aa18.67■□□□□ 0.58
CSGALNACT1-216ENST00000524213 ATP8B4Q8TF62 1192 aa18.67■□□□□ 0.58
CSGALNACT1-216ENST00000524213 BBXQ8WY36 941 aaPredicted RBP18.67■□□□□ 0.58
CSGALNACT1-216ENST00000524213 MTMR9Q96QG7 549 aa18.67■□□□□ 0.58
CSGALNACT1-216ENST00000524213 IGSF9BQ9UPX0 1349 aa18.67■□□□□ 0.58
CSGALNACT1-216ENST00000524213 SIP14410 1827 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 RBAK-RBAKDNI3L0D1 243 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 WNT7AO00755 349 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 RPLP2P05387 115 aaKnown RBP18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 PFKMP08237 780 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 OR52Z1P0C646 297 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 INSRRP14616 1297 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 SELPP16109 830 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 SYT1P21579 422 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 ADAM17P78536 824 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 EPHA7Q15375 998 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 ZNF484Q5JVG2 852 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 LRRC8DQ7L1W4 858 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 LMBR1Q8WVP7 490 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 TTC12Q9H892 705 aaPredicted RBP18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 NRBP2Q9NSY0 501 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 VAV3Q9UKW4 847 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 CEP131Q9UPN4 1083 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 COL1A2P08123 1366 aa18.66■□□□□ 0.58
CSGALNACT1-216ENST00000524213 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 LAD1O00515 517 aa18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 CAND2O75155 1236 aa18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 PARNO95453 639 aaKnown RBP18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 P4HBP07237 508 aaKnown RBP18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 TXKP42681 527 aa18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 PSMC5P62195 406 aa18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 BECN1Q14457 450 aa18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 GPNMBQ14956 572 aa18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 ZNF618Q5T7W0 954 aa18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 NCAPH2Q6IBW4 605 aa18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 TAF2Q6P1X5 1199 aa18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 TRAF7Q6Q0C0 670 aa18.65■□□□□ 0.58
CSGALNACT1-216ENST00000524213 MBLAC1A4D2B0 266 aaPredicted RBP18.64■□□□□ 0.57
CSGALNACT1-216ENST00000524213 GRXCR1A8MXD5 290 aa18.64■□□□□ 0.57
CSGALNACT1-216ENST00000524213 TOB1P50616 345 aaPredicted RBP18.64■□□□□ 0.57
CSGALNACT1-216ENST00000524213 TMEM266Q2M3C6 531 aa18.64■□□□□ 0.57
CSGALNACT1-216ENST00000524213 NEK9Q8TD19 979 aa18.64■□□□□ 0.57
CSGALNACT1-216ENST00000524213 FTOQ9C0B1 505 aaKnown RBP eCLIP18.64■□□□□ 0.57
CSGALNACT1-216ENST00000524213 MTIF3Q9H2K0 278 aaKnown RBP18.64■□□□□ 0.57
CSGALNACT1-216ENST00000524213 TMEM60Q9H2L4 133 aa18.64■□□□□ 0.57
CSGALNACT1-216ENST00000524213 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.64■□□□□ 0.57
CSGALNACT1-216ENST00000524213 TUBE1Q9UJT0 475 aa18.64■□□□□ 0.57
CSGALNACT1-216ENST00000524213 LOXHD1Q8IVV2 1947 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 ZBBXA8MT70 800 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 EML1O00423 815 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 STX6O43752 255 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 NBNO60934 754 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 OATP04181 439 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 ATP4AP20648 1035 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 THPOP40225 353 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 IGBP1P78318 339 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 PRKCEQ02156 737 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 SPIRE1Q08AE8 756 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 XKR3Q5GH77 459 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 RSPH3Q86UC2 560 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 ZSCAN16Q9H4T2 348 aaPredicted RBP18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 MTMR10Q9NXD2 777 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 PCDHB6Q9Y5E3 794 aa18.63■□□□□ 0.57
CSGALNACT1-216ENST00000524213 ZNF862O60290 1169 aa18.62■□□□□ 0.57
CSGALNACT1-216ENST00000524213 BMP15O95972 392 aa18.62■□□□□ 0.57
CSGALNACT1-216ENST00000524213 PRPHP41219 470 aa18.62■□□□□ 0.57
CSGALNACT1-216ENST00000524213 QARSP47897 775 aaKnown RBP18.62■□□□□ 0.57
CSGALNACT1-216ENST00000524213 NBR1Q14596 966 aa18.62■□□□□ 0.57
CSGALNACT1-216ENST00000524213 MBTPS1Q14703 1052 aa18.62■□□□□ 0.57
CSGALNACT1-216ENST00000524213 ZNF697Q5TEC3 545 aa18.62■□□□□ 0.57
CSGALNACT1-216ENST00000524213 RPAINQ86UA6 219 aa18.62■□□□□ 0.57
CSGALNACT1-216ENST00000524213 FAM161BQ96MY7 647 aa18.62■□□□□ 0.57
CSGALNACT1-216ENST00000524213 RAB34Q9BZG1 259 aa18.62■□□□□ 0.57
CSGALNACT1-216ENST00000524213 STK24Q9Y6E0 443 aa18.62■□□□□ 0.57
CSGALNACT1-216ENST00000524213 SLC4A7Q9Y6M7 1214 aa18.62■□□□□ 0.57
CSGALNACT1-216ENST00000524213 MICAL3Q7RTP6 2002 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms