RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 SGPL1O95470 568 aa6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 NFICP08651 508 aa6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 MAP4P27816 1152 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 BTDP43251 543 aa6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 PRRT2Q7Z6L0 340 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 MCATQ8IVS2 390 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 ANKRD13CQ8N6S4 541 aa6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 RBBP8NLQ8NC74 664 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 EZH1Q92800 747 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 ACSF2Q96CM8 615 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 KCNF1Q9H3M0 494 aa6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 SEMA6CQ9H3T2 930 aa6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 TJP2Q9UDY2 1190 aa6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 AFG3L2Q9Y4W6 797 aa6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 FAM95CA0A1B0GW59 222 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 SLC22A31A6NKX4 558 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 CTNND1O60716 968 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 ENTPD3O75355 529 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 CIAO1O76071 339 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 IL15P40933 162 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 GIPRP48546 466 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 TIMM10P62072 90 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 RASGRF1Q13972 1273 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 MAP7Q14244 749 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 PLA2G4EQ3MJ16 856 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 TREML2Q5T2D2 321 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 SLC6A19Q695T7 634 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 UBE2Q1Q7Z7E8 422 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 CLEC10AQ8IUN9 316 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 MRPL41Q8IXM3 137 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 ZGPATQ8N5A5 531 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 TP53INP1Q96A56 240 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 COA7Q96BR5 231 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 SHDQ96IW2 340 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 PAWRQ96IZ0 340 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 TMEM87BQ96K49 555 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 NEUROD6Q96NK8 337 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 IDI2Q9BXS1 227 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 FBRSQ9HAH7 460 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 DDX4Q9NQI0 724 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 GMIPQ9P107 970 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 STAP2Q9UGK3 403 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 ZNF521Q96K83 1311 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 SALL1Q9NSC2 1324 aa6.45□□□□□ -1.38
CTNNA1-239ENST00000523685 AK9Q5TCS8 1911 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 ATRNL1Q5VV63 1379 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 UPK3BL1B0FP48 263 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 CHURC1-FNTBB4DL54 471 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 UPK3BL2E5RIL1 263 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 ITGB2P05107 769 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 GTF2F1P35269 517 aaKnown RBP eCLIP6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 CAP2P40123 477 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 YARSP54577 528 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 HMGCS2P54868 508 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 MECOMQ03112 1051 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 TFCP2Q12800 502 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 SPP2Q13103 211 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 SLBPQ14493 270 aaKnown RBP eCLIP6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 NFKBIBQ15653 356 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 NKG7Q16617 165 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 GORABQ5T7V8 394 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 SPTY2D1Q68D10 685 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 PAOXQ6QHF9 649 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 BEND4Q6ZU67 534 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 UBE3DQ7Z6J8 389 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 C7orf61Q8IZ16 206 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 SLC17A8Q8NDX2 589 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 OR6P1Q8NGX9 317 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 DIS3LQ8TF46 1054 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 ANAPC16Q96DE5 110 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 ANTXR1Q9H6X2 564 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 RAI14Q9P0K7 980 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 KLHL3Q9UH77 587 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 ZMYND8Q9ULU4 1186 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 NOB1Q9ULX3 412 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 AGTPBP1Q9UPW5 1226 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 MRVI1Q9Y6F6 885 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 MROH7-TTC4A0A0A0MT08 1334 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 GAKO14976 1311 aa6.44□□□□□ -1.38
CTNNA1-239ENST00000523685 A0A1B0GUL7 405 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 MEIS3P2A8K0S8 358 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 SRGAP3O43295 1099 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 DNAJA2O60884 412 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 STK10O94804 968 aaKnown RBP6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 SYN1P17600 705 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 ETFBP38117 255 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 SLFN5Q08AF3 891 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 MVPQ14764 893 aaKnown RBP6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 ALDH1L2Q3SY69 923 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 NECAB2Q7Z6G3 386 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 FAM13CQ8NE31 585 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 TMEM40Q8WWA1 233 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 UBXN4Q92575 508 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 DHX38Q92620 1227 aaKnown RBP6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 ATG4CQ96DT6 458 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 MEIS3Q99687 375 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 FAM83CQ9BQN1 747 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 FOXQ1Q9C009 403 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms