RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 TMEM199Q8N511 208 aa7.67□□□□□ -1.18
SPIDR-218ENST00000522222 OXER1Q8TDS5 423 aa7.67□□□□□ -1.18
SPIDR-218ENST00000522222 TBCKQ8TEA7 893 aa7.67□□□□□ -1.18
SPIDR-218ENST00000522222 SEPT1Q8WYJ6 367 aa7.67□□□□□ -1.18
SPIDR-218ENST00000522222 WASF1Q92558 559 aa7.67□□□□□ -1.18
SPIDR-218ENST00000522222 WNT8BQ93098 351 aa7.67□□□□□ -1.18
SPIDR-218ENST00000522222 SCLYQ96I15 445 aa7.67□□□□□ -1.18
SPIDR-218ENST00000522222 LRCH3Q96II8 777 aa7.67□□□□□ -1.18
SPIDR-218ENST00000522222 SPATA32Q96LK8 384 aa7.67□□□□□ -1.18
SPIDR-218ENST00000522222 RNPC3Q96LT9 517 aaKnown RBP7.67□□□□□ -1.18
SPIDR-218ENST00000522222 ZNF396Q96N95 335 aaPredicted RBP7.67□□□□□ -1.18
SPIDR-218ENST00000522222 PCYT2Q99447 389 aa7.67□□□□□ -1.18
SPIDR-218ENST00000522222 TNMDQ9H2S6 317 aa7.67□□□□□ -1.18
SPIDR-218ENST00000522222 TUT1Q9H6E5 874 aaKnown RBP7.67□□□□□ -1.18
SPIDR-218ENST00000522222 GDPD2Q9HCC8 539 aa7.67□□□□□ -1.18
SPIDR-218ENST00000522222 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.67□□□□□ -1.18
SPIDR-218ENST00000522222 R3HCC1Q9Y3T6 440 aaKnown RBP7.67□□□□□ -1.18
SPIDR-218ENST00000522222 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.67□□□□□ -1.18
SPIDR-218ENST00000522222 SCN5AQ14524 2016 aa7.67□□□□□ -1.18
SPIDR-218ENST00000522222 UQCRHLA0A096LP55 91 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 CCDC194A0A1B0GVG4 234 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 C17orf102A2RUQ5 167 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 FAM205CA6NFA0 338 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 H3BQV1 296 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 RBAK-RBAKDNI3L0D1 243 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 IPO5O00410 1097 aaKnown RBP7.66□□□□□ -1.18
SPIDR-218ENST00000522222 SLC37A4O43826 429 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 NEMFO60524 1076 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 LGR5O75473 907 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 UQCRHP07919 91 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 ACRP10323 421 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 KRT2P35908 639 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 RBL2Q08999 1139 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 NR5A1Q13285 461 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 PTK7Q13308 1070 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 BFSP2Q13515 415 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 NONOQ15233 471 aaKnown RBP eCLIP7.66□□□□□ -1.18
SPIDR-218ENST00000522222 INF2Q27J81 1249 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 TRIM71Q2Q1W2 868 aaKnown RBP7.66□□□□□ -1.18
SPIDR-218ENST00000522222 LRIT3Q3SXY7 679 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 EARS2Q5JPH6 523 aaKnown RBP7.66□□□□□ -1.18
SPIDR-218ENST00000522222 DNTTIP2Q5QJE6 756 aaKnown RBP7.66□□□□□ -1.18
SPIDR-218ENST00000522222 TMEM240Q5SV17 173 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 PSRC1Q6PGN9 363 aaPredicted RBP7.66□□□□□ -1.18
SPIDR-218ENST00000522222 SERINC5Q86VE9 423 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 CCDC155Q8N6L0 562 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 CAGE1Q8TC20 777 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 LMBR1Q8WVP7 490 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 GLG1Q92896 1179 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 TNFRSF25Q93038 417 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 VWCEQ96DN2 955 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.66□□□□□ -1.18
SPIDR-218ENST00000522222 ZNF577Q9BSK1 485 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 CLSTN2Q9H4D0 955 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 IL23AQ9NPF7 189 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 SPTLC3Q9NUV7 552 aa7.66□□□□□ -1.18
SPIDR-218ENST00000522222 TRIP12Q14669 1992 aaPredicted RBP7.66□□□□□ -1.18
SPIDR-218ENST00000522222 MSH4O15457 936 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 DHX15O43143 795 aaKnown RBP7.65□□□□□ -1.18
SPIDR-218ENST00000522222 TREHO43280 583 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 MMP1P03956 469 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 SELPP16109 830 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 CDC25BP30305 580 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 GTF2F1P35269 517 aaKnown RBP eCLIP7.65□□□□□ -1.18
SPIDR-218ENST00000522222 USP11P51784 963 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 GUCY1B3Q02153 619 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 TCHHQ07283 1943 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 PPFIA1Q13136 1202 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 NOLC1Q14978 699 aaKnown RBP eCLIP7.65□□□□□ -1.18
SPIDR-218ENST00000522222 GRIK4Q16099 956 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 KRT40Q6A162 431 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 ZNF746Q6NUN9 644 aaPredicted RBP7.65□□□□□ -1.18
SPIDR-218ENST00000522222 TRAF7Q6Q0C0 670 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 MOXD1Q6UVY6 613 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 PIK3AP1Q6ZUJ8 805 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 ZNF365Q70YC5 407 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 LRRC8DQ7L1W4 858 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 C16orf59Q7L2K0 433 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 NEK8Q86SG6 692 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 CCDC60Q8IWA6 550 aaPredicted RBP7.65□□□□□ -1.18
SPIDR-218ENST00000522222 DIS3L2Q8IYB7 885 aaKnown RBP7.65□□□□□ -1.18
SPIDR-218ENST00000522222 RETREG2Q8NC44 543 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 MYRIPQ8NFW9 859 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 AFAP1L1Q8TED9 768 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 SLC5A5Q92911 643 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 ATP6V0A1Q93050 837 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 GJA10Q969M2 543 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 MBOAT7Q96N66 472 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 RNPEPQ9H4A4 650 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 SMARCAD1Q9H4L7 1026 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 AZI2Q9H6S1 392 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 BRMS1Q9HCU9 246 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 SETD4Q9NVD3 440 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 ERAP1Q9NZ08 941 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 TCEAL9Q9UHQ7 104 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 MYH15Q9Y2K3 1946 aa7.65□□□□□ -1.18
SPIDR-218ENST00000522222 TET1Q8NFU7 2136 aa7.64□□□□□ -1.19
SPIDR-218ENST00000522222 NRCAMQ92823 1304 aa7.64□□□□□ -1.19
SPIDR-218ENST00000522222 IGSF9BQ9UPX0 1349 aa7.64□□□□□ -1.19
SPIDR-218ENST00000522222 CYP3A7-CYP3A51PA0A087WV96 503 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms