RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 TRIM48Q8IWZ4 208 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 Q8N1X5 172 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 IGSF22Q8N9C0 903 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 DTX3Q8N9I9 347 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 TARS2Q9BW92 718 aaKnown RBP4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 SAMD15Q9P1V8 674 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 PRKAB1Q9Y478 270 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 GSG1L2A8MUP6 293 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 PDE8AO60658 829 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 GLRX3O76003 335 aaKnown RBP4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 CYP1A1P04798 512 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 FAHP16930 419 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 TACR2P21452 398 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 ACVRL1P37023 503 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 GDF5P43026 501 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 DNM2P50570 870 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 GPR19Q15760 415 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 CRY1Q16526 586 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 PAN2Q504Q3 1202 aaKnown RBP4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 PHF19Q5T6S3 580 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 PIK3R6Q5UE93 754 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 UBE2R2Q712K3 238 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 OVCH1Q7RTY7 1134 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 LOXL4Q96JB6 756 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 WRNIP1Q96S55 665 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 MTFR1LQ9H019 292 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 TMEM168Q9H0V1 697 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 TMX1Q9H3N1 280 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 L2HGDHQ9H9P8 463 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 CATSPERZQ9NTU4 200 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 PPP4R1LQ9P1A2 415 aa4.57□□□□□ -1.68
TRAPPC13-212ENST00000520525 TCRBV5S4A2TA0A5A2 114 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 ZNF561-AS1K7EIQ3 104 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 M0R2C6 588 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 LAMTOR5O43504 91 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 KPNA6O60684 536 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 CYP7B1O75881 506 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 AMY2AP04746 511 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 VIL1P09327 827 aaKnown RBP4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 PDE6AP16499 860 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 AMY2BP19961 511 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 NEK4P51957 841 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 EPHA5P54756 1037 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 LACTBP83111 547 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 PCBP1Q15365 356 aaKnown RBP eCLIP4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 CFAP100Q494V2 611 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 TMEM177Q53S58 311 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 RNF187Q5TA31 235 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 VASNQ6EMK4 673 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 LIMS2Q7Z4I7 341 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 OSTM1Q86WC4 334 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 ZFPM1Q8IX07 1006 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 PPM1KQ8N3J5 372 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 CISD2Q8N5K1 135 aaKnown RBP4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 NUDT10Q8NFP7 164 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 IGDCC4Q8TDY8 1250 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 SH3RF2Q8TEC5 729 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 NUDT11Q96G61 164 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 WNK4Q96J92 1243 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 SLITRK6Q9H5Y7 841 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 DLL4Q9NR61 685 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 DSEQ9UL01 958 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 MAPRE3Q9UPY8 281 aa4.56□□□□□ -1.68
TRAPPC13-212ENST00000520525 ANKRD62A6NC57 917 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 ACOT7O00154 380 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 CBX4O00257 560 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 CYR61O00622 381 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 DNAJC6O75061 913 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 KLHL18O94889 574 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 STAT3P40763 770 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 MECP2P51608 486 aaKnown RBP4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 JAM2P57087 298 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 NFATC3Q12968 1075 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 CD276Q5ZPR3 534 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 TRMT10BQ6PF06 316 aaKnown RBP4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 ARHGAP36Q6ZRI8 547 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 KCTD1Q719H9 257 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 KRT26Q7Z3Y9 468 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 SPRED1Q7Z699 444 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 FILIP1Q7Z7B0 1213 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 RNF180Q86T96 592 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 AHI1Q8N157 1196 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 ORAI3Q9BRQ5 295 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 SPC25Q9HBM1 224 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 SMURF1Q9HCE7 757 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 IFT57Q9NWB7 429 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 FTSJ1Q9UET6 329 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 SRPK3Q9UPE1 567 aa4.55□□□□□ -1.68
TRAPPC13-212ENST00000520525 ZNF536O15090 1300 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 TRAF5O00463 557 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 MAN2B1O00754 1011 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 GPR42O15529 346 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 IL18BPO95998 194 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 KNG1P01042 644 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 KRT15P19012 456 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 EPHB4P54760 987 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 SEPT7Q16181 437 aaKnown RBP4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 SKIDA1Q1XH10 827 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 CRIP3Q6Q6R5 217 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms