RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 AEBP2Q6ZN18 517 aaPredicted RBP21.58■■□□□ 1.05
TRAPPC13-212ENST00000520525 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
TRAPPC13-212ENST00000520525 SENP3Q9H4L4 574 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC13-212ENST00000520525 PHF23Q9BUL5 403 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC13-212ENST00000520525 FOXD1Q16676 465 aa17.22■□□□□ 0.35
TRAPPC13-212ENST00000520525 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
TRAPPC13-212ENST00000520525 MSH5O43196 834 aa16.17■□□□□ 0.18
TRAPPC13-212ENST00000520525 PLPPR3Q6T4P5 718 aa16.01■□□□□ 0.15
TRAPPC13-212ENST00000520525 PIAS4Q8N2W9 510 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC13-212ENST00000520525 PPP6R1Q9UPN7 881 aa15.93■□□□□ 0.14
TRAPPC13-212ENST00000520525 ADRA2BP18089 450 aa15.84■□□□□ 0.13
TRAPPC13-212ENST00000520525 MAPK8IP2Q13387 824 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC13-212ENST00000520525 DMRT2Q9Y5R5 561 aa14.57□□□□□ -0.08
TRAPPC13-212ENST00000520525 SCAF1Q9H7N4 1312 aaKnown RBP14.45□□□□□ -0.1
TRAPPC13-212ENST00000520525 CACNB1Q02641 598 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC13-212ENST00000520525 PPP4R3CPQ6ZMV5 832 aa14.02□□□□□ -0.17
TRAPPC13-212ENST00000520525 DCAF8L1A6NGE4 600 aa13.95□□□□□ -0.18
TRAPPC13-212ENST00000520525 HOXD11P31277 338 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC13-212ENST00000520525 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
TRAPPC13-212ENST00000520525 RNF39Q9H2S5 420 aa13.8□□□□□ -0.2
TRAPPC13-212ENST00000520525 RNF216Q9NWF9 866 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC13-212ENST00000520525 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
TRAPPC13-212ENST00000520525 DNAJC5BQ9UF47 199 aa13.51□□□□□ -0.25
TRAPPC13-212ENST00000520525 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
TRAPPC13-212ENST00000520525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRAPPC13-212ENST00000520525 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
TRAPPC13-212ENST00000520525 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC13-212ENST00000520525 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC13-212ENST00000520525 DSG3P32926 999 aa12.84□□□□□ -0.35
TRAPPC13-212ENST00000520525 CAPN15O75808 1086 aa12.82□□□□□ -0.36
TRAPPC13-212ENST00000520525 KCNA4P22459 653 aa12.72□□□□□ -0.37
TRAPPC13-212ENST00000520525 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
TRAPPC13-212ENST00000520525 POTEHQ6S545 545 aa12.69□□□□□ -0.38
TRAPPC13-212ENST00000520525 TRHP20396 242 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC13-212ENST00000520525 APLP2Q06481 763 aa12.52□□□□□ -0.41
TRAPPC13-212ENST00000520525 ABCB7O75027 752 aa12.5□□□□□ -0.41
TRAPPC13-212ENST00000520525 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC13-212ENST00000520525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC13-212ENST00000520525 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
TRAPPC13-212ENST00000520525 SAMD1Q6SPF0 538 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC13-212ENST00000520525 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
TRAPPC13-212ENST00000520525 MYCNP04198 464 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC13-212ENST00000520525 POLA2Q14181 598 aa12.19□□□□□ -0.46
TRAPPC13-212ENST00000520525 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
TRAPPC13-212ENST00000520525 ATF5Q9Y2D1 282 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC13-212ENST00000520525 SLC4A1APQ9BWU0 796 aaKnown RBP11.95□□□□□ -0.5
TRAPPC13-212ENST00000520525 FOXD4L1Q9NU39 408 aa11.93□□□□□ -0.5
TRAPPC13-212ENST00000520525 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
TRAPPC13-212ENST00000520525 ZBTB12Q9Y330 459 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC13-212ENST00000520525 REM2Q8IYK8 340 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC13-212ENST00000520525 OSCARQ8IYS5 282 aa11.78□□□□□ -0.52
TRAPPC13-212ENST00000520525 SP7Q8TDD2 431 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC13-212ENST00000520525 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
TRAPPC13-212ENST00000520525 ZBTB22O15209 634 aa11.71□□□□□ -0.53
TRAPPC13-212ENST00000520525 PITPNM1O00562 1244 aa11.67□□□□□ -0.54
TRAPPC13-212ENST00000520525 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAPPC13-212ENST00000520525 ATXN8OSP0DMR3 200 aa11.6□□□□□ -0.55
TRAPPC13-212ENST00000520525 HAX1O00165 279 aa11.59□□□□□ -0.55
TRAPPC13-212ENST00000520525 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
TRAPPC13-212ENST00000520525 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
TRAPPC13-212ENST00000520525 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
TRAPPC13-212ENST00000520525 FBLN2P98095 1184 aa11.48□□□□□ -0.57
TRAPPC13-212ENST00000520525 EVX2Q03828 476 aa11.48□□□□□ -0.57
TRAPPC13-212ENST00000520525 MKRN4PQ13434 485 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC13-212ENST00000520525 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
TRAPPC13-212ENST00000520525 SPDYE1Q8NFV5 336 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC13-212ENST00000520525 CLEC11AQ9Y240 323 aa11.36□□□□□ -0.59
TRAPPC13-212ENST00000520525 ZNF692Q9BU19 519 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC13-212ENST00000520525 SSUH2Q9Y2M2 353 aa11.34□□□□□ -0.59
TRAPPC13-212ENST00000520525 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
TRAPPC13-212ENST00000520525 C19orf67A6NJJ6 358 aa11.28□□□□□ -0.6
TRAPPC13-212ENST00000520525 EHMT2Q96KQ7 1210 aa11.28□□□□□ -0.6
TRAPPC13-212ENST00000520525 CHADLQ6NUI6 762 aa11.18□□□□□ -0.62
TRAPPC13-212ENST00000520525 GABBR2O75899 941 aa11.17□□□□□ -0.62
TRAPPC13-212ENST00000520525 PABPN1Q86U42 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRAPPC13-212ENST00000520525 PRR29P0C7W0 189 aa11.14□□□□□ -0.63
TRAPPC13-212ENST00000520525 LHX8Q68G74 356 aa11.04□□□□□ -0.64
TRAPPC13-212ENST00000520525 FARP1Q9Y4F1 1045 aaPredicted RBP11□□□□□ -0.65
TRAPPC13-212ENST00000520525 CD44P16070 742 aaKnown RBP10.98□□□□□ -0.65
TRAPPC13-212ENST00000520525 POTEIP0CG38 1075 aa10.96□□□□□ -0.65
TRAPPC13-212ENST00000520525 CLCN6P51797 869 aa10.89□□□□□ -0.67
TRAPPC13-212ENST00000520525 CREBZFQ9NS37 354 aa10.83□□□□□ -0.68
TRAPPC13-212ENST00000520525 ZNF579Q8NAF0 562 aaKnown RBP10.81□□□□□ -0.68
TRAPPC13-212ENST00000520525 DCBLD2Q96PD2 775 aa10.79□□□□□ -0.68
TRAPPC13-212ENST00000520525 ZRANB1Q9UGI0 708 aa10.79□□□□□ -0.68
TRAPPC13-212ENST00000520525 STAG3Q9UJ98 1225 aa10.79□□□□□ -0.68
TRAPPC13-212ENST00000520525 SPDYE4A6NLX3 237 aa10.71□□□□□ -0.69
TRAPPC13-212ENST00000520525 GALR2O43603 387 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC13-212ENST00000520525 PLSCR2Q9NRY7 297 aa10.65□□□□□ -0.7
TRAPPC13-212ENST00000520525 PHF12Q96QT6 1004 aa10.63□□□□□ -0.71
TRAPPC13-212ENST00000520525 MNX1P50219 401 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC13-212ENST00000520525 PAK3O75914 559 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC13-212ENST00000520525 POTEB2H3BUK9 544 aa10.6□□□□□ -0.71
TRAPPC13-212ENST00000520525 OTUD5Q96G74 571 aa10.59□□□□□ -0.71
TRAPPC13-212ENST00000520525 NPM1P06748 294 aaKnown RBP eCLIP10.58□□□□□ -0.72
TRAPPC13-212ENST00000520525 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
TRAPPC13-212ENST00000520525 MS4A3Q96HJ5 214 aa10.47□□□□□ -0.73
TRAPPC13-212ENST00000520525 ASTLQ6HA08 431 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC13-212ENST00000520525 ATMINO43313 823 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC13-212ENST00000520525 PROM2Q8N271 834 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms