RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 CYFIP1Q7L576 1253 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 HEATR3Q7Z4Q2 680 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 SAMD3Q8N6K7 520 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 BAP1Q92560 729 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 PGBD1Q96JS3 809 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 MTA3Q9BTC8 594 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 COL25A1Q9BXS0 654 aaPredicted RBP11.09□□□□□ -0.63
TTC1-202ENST00000518560 CERS4Q9HA82 394 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 LOXHD1Q8IVV2 1947 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 UNC80Q8N2C7 3258 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 RFXAPO00287 272 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 CA3P07451 260 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 PFKMP08237 780 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 CALM1P0DP23 149 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 CALM2P0DP24 149 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 CALM3P0DP25 149 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 CKBP12277 381 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 SELPP16109 830 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 ICAM3P32942 547 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 DEFB103AP81534 67 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 EXOSC10Q01780 885 aaKnown RBP11.08□□□□□ -0.64
TTC1-202ENST00000518560 TRAF1Q13077 416 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 MBTPS1Q14703 1052 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 CCDC85BQ15834 202 aaPredicted RBP11.08□□□□□ -0.64
TTC1-202ENST00000518560 ZNF618Q5T7W0 954 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 UTP14CQ5TAP6 766 aaKnown RBP11.08□□□□□ -0.64
TTC1-202ENST00000518560 PCNX4Q63HM2 1172 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 WWC2Q6AWC2 1192 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 SGMS1Q86VZ5 419 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 TMTC2Q8N394 836 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 TMEM151AQ8N4L1 468 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 CCDC155Q8N6L0 562 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 FANCBQ8NB91 859 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 AFAP1L1Q8TED9 768 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 CUL5Q93034 780 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 NEK1Q96PY6 1258 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 GAS2L1Q99501 681 aaPredicted RBP11.08□□□□□ -0.64
TTC1-202ENST00000518560 GPR20Q99678 358 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 KATNAL1Q9BW62 490 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 OSBPL7Q9BZF2 842 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 SLC28A3Q9HAS3 691 aa11.08□□□□□ -0.64
TTC1-202ENST00000518560 PRUNE2Q8WUY3 3088 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 CHD7Q9P2D1 2997 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 KLF18A0A0U1RQI7 1052 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 LCHNA4D1U4 455 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 EPOPA6NHQ4 379 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 SPATA31C2B4DYI2 1134 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 PIK3CDO00329 1044 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 NOP56O00567 594 aaKnown RBP11.07□□□□□ -0.64
TTC1-202ENST00000518560 ADAMTS3O15072 1205 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 FIBPO43427 364 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 MAN1A2O60476 641 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 ATP9AO75110 1047 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 PPFIA4O75335 1185 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 CTSHP09668 335 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 SMIM10L2AP0DMW4 78 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 SMIM10L2BP0DMW5 78 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 ACTN1P12814 892 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 IGFBP4P22692 258 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 SMARCA1P28370 1054 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 CDC27P30260 824 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 RFC2P35250 354 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 GNAQP50148 359 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 WDR5P61964 334 aaKnown RBP11.07□□□□□ -0.64
TTC1-202ENST00000518560 RBL2Q08999 1139 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 PTK7Q13308 1070 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 GNPTABQ3T906 1256 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 KCNV1Q6PIU1 500 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 CAGE1Q8TC20 777 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 LZTS2Q9BRK4 669 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 PSTPIP2Q9H939 334 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 NAP1L2Q9ULW6 460 aaPredicted RBP11.07□□□□□ -0.64
TTC1-202ENST00000518560 PCDHA11Q9Y5I1 949 aa11.07□□□□□ -0.64
TTC1-202ENST00000518560 NLRC5Q86WI3 1866 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 WDR81Q562E7 1941 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 GOLGA8AA7E2F4 631 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 GOLGA8BA8MQT2 603 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 H3BRB1 525 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 TREHO43280 583 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 TGFB3P10600 412 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 TIMP2P16035 220 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 ITGB5P18084 799 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 APOBRQ0VD83 1088 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 RTN1Q16799 776 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 PTPRNQ16849 979 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 RNF20Q5VTR2 975 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 KRT40Q6A162 431 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 METTL7BQ6UX53 244 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 DHX32Q7L7V1 743 aaKnown RBP11.06□□□□□ -0.64
TTC1-202ENST00000518560 HERC6Q8IVU3 1022 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 MICALL1Q8N3F8 863 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 CCDC136Q96JN2 1154 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 SLC9A7Q96T83 725 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 RNPEPQ9H4A4 650 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 TUT1Q9H6E5 874 aaKnown RBP11.06□□□□□ -0.64
TTC1-202ENST00000518560 FAM217BQ9NTX9 383 aaPredicted RBP11.06□□□□□ -0.64
TTC1-202ENST00000518560 SETD4Q9NVD3 440 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 EVA1BQ9NVM1 165 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 TMEM260Q9NX78 707 aa11.06□□□□□ -0.64
TTC1-202ENST00000518560 PCDHA6Q9UN73 950 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms