RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 MYH9P35579 1960 aaKnown RBP8.39□□□□□ -1.07
NR1I3-231ENST00000512340 IGKV6D-21A0A0A0MT36 114 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 EFCAB14O75071 495 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 CD2BP2O95400 341 aaKnown RBP8.38□□□□□ -1.07
NR1I3-231ENST00000512340 SELPP16109 830 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 PTGS1P23219 599 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 MAGEA10P43363 369 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-231ENST00000512340 QARSP47897 775 aaKnown RBP8.38□□□□□ -1.07
NR1I3-231ENST00000512340 MDM2Q00987 491 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-231ENST00000512340 EPHA7Q15375 998 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 ZNF174Q15697 407 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 GRIK4Q16099 956 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 NCAPH2Q6IBW4 605 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 GDF6Q6KF10 455 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-231ENST00000512340 DTHD1Q6ZMT9 781 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 SERINC5Q86VE9 423 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 TRIM50Q86XT4 487 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 TDHQ8IZJ6 230 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 DEFB123Q8N688 67 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 BADQ92934 168 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 LENG9Q96B70 501 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 MAP7D2Q96T17 732 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 NOC4LQ9BVI4 516 aaKnown RBP8.38□□□□□ -1.07
NR1I3-231ENST00000512340 PPP1R12CQ9BZL4 782 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 FTOQ9C0B1 505 aaKnown RBP eCLIP8.38□□□□□ -1.07
NR1I3-231ENST00000512340 UNC45AQ9H3U1 944 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 RNPEPQ9H4A4 650 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 ZSWIM4Q9H7M6 989 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 KCNMB3Q9NPA1 279 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 SETD4Q9NVD3 440 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 RNF216Q9NWF9 866 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-231ENST00000512340 ATP6V1DQ9Y5K8 247 aa8.38□□□□□ -1.07
NR1I3-231ENST00000512340 MAFBQ9Y5Q3 323 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-231ENST00000512340 GRIN2DO15399 1336 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 UNC80Q8N2C7 3258 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 TRIM43BA6NCK2 446 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 DDX11L8A8MPP1 907 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 RSPH10B2B2RC85 870 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 STX6O43752 255 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 SLC37A4O43826 429 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 GAS2O43903 313 aaKnown RBP8.37□□□□□ -1.07
NR1I3-231ENST00000512340 CCNE2O96020 404 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 FGBP02675 491 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 OATP04181 439 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 RSPH10BP0C881 870 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 CYP2C9P11712 490 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 INSRRP14616 1297 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 MUTP22033 750 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 THPOP40225 353 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 PRPHP41219 470 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 IGBP1P78318 339 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 TBC1D8BQ0IIM8 1120 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 PDIA5Q14554 519 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 PLCB4Q15147 1175 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 KRT79Q5XKE5 535 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 ARL6IP4Q66PJ3 421 aaKnown RBP8.37□□□□□ -1.07
NR1I3-231ENST00000512340 FAM109BQ6ICB4 259 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-231ENST00000512340 LRRC8DQ7L1W4 858 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 CCDC60Q8IWA6 550 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-231ENST00000512340 KCTD17Q8N5Z5 321 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 USP38Q8NB14 1042 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 LMBR1Q8WVP7 490 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 SLC7A3Q8WY07 619 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 TRIM43Q96BQ3 446 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-231ENST00000512340 ZNF396Q96N95 335 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-231ENST00000512340 NAP1L5Q96NT1 182 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-231ENST00000512340 BCAS3Q9H6U6 928 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 IL23AQ9NPF7 189 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 PCDHA2Q9Y5H9 948 aa8.37□□□□□ -1.07
NR1I3-231ENST00000512340 IGSF9BQ9UPX0 1349 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 SOX1O00570 391 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-231ENST00000512340 ADAMTS3O15072 1205 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 SLC26A4O43511 780 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 DTNBO60941 627 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 XRCC6P12956 609 aaKnown RBP eCLIP8.36□□□□□ -1.07
NR1I3-231ENST00000512340 SYT1P21579 422 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 KLRC1P26715 233 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 CYP2C18P33260 490 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 ANP32AP39687 249 aaKnown RBP8.36□□□□□ -1.07
NR1I3-231ENST00000512340 TXLNAP40222 546 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 RFC5P40937 340 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 KCNJ6P48051 423 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 CCL23P55773 120 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 PRKCEQ02156 737 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 RBL2Q08999 1139 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 PTGDRQ13258 359 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 ATL3Q6DD88 541 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 SH3RF1Q7Z6J0 888 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 RPAINQ86UA6 219 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 TPH2Q8IWU9 490 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 C4orf19Q8IY42 314 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 METTL13Q8N6R0 699 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 RASSF8Q8NHQ8 419 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 SEPT8Q92599 483 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 LRCH3Q96II8 777 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 CDK5RAP3Q96JB5 506 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 SCLT1Q96NL6 688 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 NACC1Q96RE7 527 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 UIMC1Q96RL1 719 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 TUFT1Q9NNX1 390 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms