RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 PTK7Q13308 1070 aa14.43□□□□□ -0.1
COL6A6-203ENST00000511332 BFSP2Q13515 415 aa14.43□□□□□ -0.1
COL6A6-203ENST00000511332 ZNF484Q5JVG2 852 aa14.43□□□□□ -0.1
COL6A6-203ENST00000511332 DTHD1Q6ZMT9 781 aa14.43□□□□□ -0.1
COL6A6-203ENST00000511332 SERINC5Q86VE9 423 aa14.43□□□□□ -0.1
COL6A6-203ENST00000511332 CAGE1Q8TC20 777 aa14.43□□□□□ -0.1
COL6A6-203ENST00000511332 LXNQ9BS40 222 aa14.43□□□□□ -0.1
COL6A6-203ENST00000511332 SETD4Q9NVD3 440 aa14.43□□□□□ -0.1
COL6A6-203ENST00000511332 TCHHQ07283 1943 aa14.43□□□□□ -0.1
COL6A6-203ENST00000511332 MBLAC1A4D2B0 266 aaPredicted RBP14.42□□□□□ -0.1
COL6A6-203ENST00000511332 TRIM43BA6NCK2 446 aa14.42□□□□□ -0.1
COL6A6-203ENST00000511332 H0YGN5 161 aa14.42□□□□□ -0.1
COL6A6-203ENST00000511332 ZNF862O60290 1169 aa14.42□□□□□ -0.1
COL6A6-203ENST00000511332 IGBP1P78318 339 aa14.42□□□□□ -0.1
COL6A6-203ENST00000511332 PDIA5Q14554 519 aa14.42□□□□□ -0.1
COL6A6-203ENST00000511332 SF3A1Q15459 793 aaKnown RBP14.42□□□□□ -0.1
COL6A6-203ENST00000511332 XKR3Q5GH77 459 aa14.42□□□□□ -0.1
COL6A6-203ENST00000511332 TAF2Q6P1X5 1199 aa14.42□□□□□ -0.1
COL6A6-203ENST00000511332 SH3RF1Q7Z6J0 888 aa14.42□□□□□ -0.1
COL6A6-203ENST00000511332 IGSF22Q8N9C0 903 aa14.42□□□□□ -0.1
COL6A6-203ENST00000511332 TRIM43Q96BQ3 446 aaPredicted RBP14.42□□□□□ -0.1
COL6A6-203ENST00000511332 ZNF396Q96N95 335 aaPredicted RBP14.42□□□□□ -0.1
COL6A6-203ENST00000511332 LBHD1Q9BQE6 289 aaPredicted RBP14.42□□□□□ -0.1
COL6A6-203ENST00000511332 EIF2AK1Q9BQI3 630 aaKnown RBP14.42□□□□□ -0.1
COL6A6-203ENST00000511332 NOC4LQ9BVI4 516 aaKnown RBP14.42□□□□□ -0.1
COL6A6-203ENST00000511332 ZSWIM4Q9H7M6 989 aa14.42□□□□□ -0.1
COL6A6-203ENST00000511332 NRBP2Q9NSY0 501 aa14.42□□□□□ -0.1
COL6A6-203ENST00000511332 LRWD1Q9UFC0 647 aa14.42□□□□□ -0.1
COL6A6-203ENST00000511332 SEPT9Q9UHD8 586 aaPredicted RBP14.42□□□□□ -0.1
COL6A6-203ENST00000511332 TREHO43280 583 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 CAND2O75155 1236 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 TIMP1P01033 207 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 CYP2C9P11712 490 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 ATP4AP20648 1035 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 ADAM17P78536 824 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 CYP4A11Q02928 519 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 RBL2Q08999 1139 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 PKP1Q13835 747 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 FOXD4L5Q5VV16 416 aaPredicted RBP14.41□□□□□ -0.1
COL6A6-203ENST00000511332 C4orf19Q8IY42 314 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 FOXD4L4Q8WXT5 416 aaPredicted RBP14.41□□□□□ -0.1
COL6A6-203ENST00000511332 DYDC2Q96IM9 177 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 CTAGE1Q96RT6 745 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 PPP1R12CQ9BZL4 782 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 TUFT1Q9NNX1 390 aa14.41□□□□□ -0.1
COL6A6-203ENST00000511332 CEP290O15078 2479 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 VWA3AA6NCI4 1184 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 LYPLA2O95372 231 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 BRD1O95696 1058 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 MUTP22033 750 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 ZNF200P98182 395 aaPredicted RBP14.4□□□□□ -0.1
COL6A6-203ENST00000511332 HIC1Q14526 733 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 PRPF38BQ5VTL8 546 aaKnown RBP14.4□□□□□ -0.1
COL6A6-203ENST00000511332 ATL3Q6DD88 541 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 FAM173BQ6P4H8 233 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 TRMT1LQ7Z2T5 733 aaKnown RBP14.4□□□□□ -0.1
COL6A6-203ENST00000511332 RSPH3Q86UC2 560 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 TPH2Q8IWU9 490 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 TMEM199Q8N511 208 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 RETREG2Q8NC44 543 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 TRAPPC12Q8WVT3 735 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 AK8Q96MA6 479 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 CCDC43Q96MW1 224 aaKnown RBP14.4□□□□□ -0.1
COL6A6-203ENST00000511332 HSD17B14Q9BPX1 270 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 POLR3CQ9BUI4 534 aaPredicted RBP14.4□□□□□ -0.1
COL6A6-203ENST00000511332 NIFKQ9BYG3 293 aaKnown RBP14.4□□□□□ -0.1
COL6A6-203ENST00000511332 RGL1Q9NZL6 768 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 PPME1Q9Y570 386 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 ATP6V1DQ9Y5K8 247 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 CLIC4Q9Y696 253 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 MORC2Q9Y6X9 1032 aaPredicted RBP14.4□□□□□ -0.1
COL6A6-203ENST00000511332 KDM3AQ9Y4C1 1321 aa14.4□□□□□ -0.1
COL6A6-203ENST00000511332 ZBTB42B2RXF5 422 aa14.39□□□□□ -0.11
COL6A6-203ENST00000511332 MAGEB2O15479 319 aa14.39□□□□□ -0.11
COL6A6-203ENST00000511332 SLITRK3O94933 977 aa14.39□□□□□ -0.11
COL6A6-203ENST00000511332 PARNO95453 639 aaKnown RBP14.39□□□□□ -0.11
COL6A6-203ENST00000511332 RPA1P27694 616 aa14.39□□□□□ -0.11
COL6A6-203ENST00000511332 YWHABP31946 246 aaKnown RBP14.39□□□□□ -0.11
COL6A6-203ENST00000511332 NASPP49321 788 aaPredicted RBP14.39□□□□□ -0.11
COL6A6-203ENST00000511332 FPGSQ05932 587 aa14.39□□□□□ -0.11
COL6A6-203ENST00000511332 CTTNQ14247 550 aaKnown RBP14.39□□□□□ -0.11
COL6A6-203ENST00000511332 PTPAQ15257 358 aa14.39□□□□□ -0.11
COL6A6-203ENST00000511332 MARCH8Q5T0T0 291 aa14.39□□□□□ -0.11
COL6A6-203ENST00000511332 KRT79Q5XKE5 535 aa14.39□□□□□ -0.11
COL6A6-203ENST00000511332 MFSD5Q6N075 450 aa14.39□□□□□ -0.11
COL6A6-203ENST00000511332 MTHFD1LQ6UB35 978 aa14.39□□□□□ -0.11
COL6A6-203ENST00000511332 OTUD6AQ7L8S5 288 aa14.39□□□□□ -0.11
COL6A6-203ENST00000511332 DHX38Q92620 1227 aaKnown RBP14.39□□□□□ -0.11
COL6A6-203ENST00000511332 USP28Q96RU2 1077 aa14.39□□□□□ -0.11
COL6A6-203ENST00000511332 FTOQ9C0B1 505 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL6A6-203ENST00000511332 PCDHA2Q9Y5H9 948 aa14.39□□□□□ -0.11
COL6A6-203ENST00000511332 SMIM35A0A1B0GVV1 85 aa14.38□□□□□ -0.11
COL6A6-203ENST00000511332 DDX11L8A8MPP1 907 aa14.38□□□□□ -0.11
COL6A6-203ENST00000511332 C22orf31O95567 290 aa14.38□□□□□ -0.11
COL6A6-203ENST00000511332 YEATS4O95619 227 aa14.38□□□□□ -0.11
COL6A6-203ENST00000511332 CKBP12277 381 aa14.38□□□□□ -0.11
COL6A6-203ENST00000511332 SELPP16109 830 aa14.38□□□□□ -0.11
COL6A6-203ENST00000511332 KLRC1P26715 233 aa14.38□□□□□ -0.11
COL6A6-203ENST00000511332 CYP2C18P33260 490 aa14.38□□□□□ -0.11
COL6A6-203ENST00000511332 RFC2P35250 354 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms