RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 ABHD8Q96I13 439 aa6.1□□□□□ -1.43
PROM1-211ENST00000511153 TEKT3Q9BXF9 490 aa6.1□□□□□ -1.43
PROM1-211ENST00000511153 TTC12Q9H892 705 aaPredicted RBP6.1□□□□□ -1.43
PROM1-211ENST00000511153 POLD4Q9HCU8 107 aa6.1□□□□□ -1.43
PROM1-211ENST00000511153 JPH1Q9HDC5 661 aaPredicted RBP6.1□□□□□ -1.43
PROM1-211ENST00000511153 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.1□□□□□ -1.43
PROM1-211ENST00000511153 RGL1Q9NZL6 768 aa6.1□□□□□ -1.43
PROM1-211ENST00000511153 CHMP5Q9NZZ3 219 aa6.1□□□□□ -1.43
PROM1-211ENST00000511153 GNEQ9Y223 722 aaKnown RBP6.1□□□□□ -1.43
PROM1-211ENST00000511153 GSTTP1A0A1W2PQM5 241 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 DHX15O43143 795 aaKnown RBP6.09□□□□□ -1.43
PROM1-211ENST00000511153 TLL1O43897 1013 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 BAG4O95429 457 aaKnown RBP6.09□□□□□ -1.43
PROM1-211ENST00000511153 TCF7P36402 384 aaPredicted RBP6.09□□□□□ -1.43
PROM1-211ENST00000511153 ACTR2P61160 394 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 IGBP1P78318 339 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 ZNF200P98182 395 aaPredicted RBP6.09□□□□□ -1.43
PROM1-211ENST00000511153 DHX8Q14562 1220 aaKnown RBP6.09□□□□□ -1.43
PROM1-211ENST00000511153 LRRC41Q15345 812 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 KCNA10Q16322 511 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 PKN2Q16513 984 aaKnown RBP6.09□□□□□ -1.43
PROM1-211ENST00000511153 FSCN1Q16658 493 aaKnown RBP6.09□□□□□ -1.43
PROM1-211ENST00000511153 Q4G0T1 1027 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 RILPL1Q5EBL4 403 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 FAM47CQ5HY64 1035 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 PLA2G4FQ68DD2 849 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 SWSAP1Q6NVH7 229 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 MIER3Q7Z3K6 550 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 U2AF1L4Q8WU68 220 aaKnown RBP6.09□□□□□ -1.43
PROM1-211ENST00000511153 TRAPPC12Q8WVT3 735 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 TSC1Q92574 1164 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 GLG1Q92896 1179 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 SLC5A5Q92911 643 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 ARMC5Q96C12 935 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 DYDC2Q96IM9 177 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 ZNF668Q96K58 619 aaPredicted RBP6.09□□□□□ -1.43
PROM1-211ENST00000511153 PPP1R16BQ96T49 567 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 GPR20Q99678 358 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 GABBR1Q9UBS5 961 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 SLC9A2Q9UBY0 812 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 VAV3Q9UKW4 847 aa6.09□□□□□ -1.43
PROM1-211ENST00000511153 WDR81Q562E7 1941 aa6.09□□□□□ -1.44
PROM1-211ENST00000511153 TRIP12Q14669 1992 aaPredicted RBP6.08□□□□□ -1.44
PROM1-211ENST00000511153 CYP3A7-CYP3A51PA0A087WV96 503 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 RBM47A0AV96 593 aaKnown RBP6.08□□□□□ -1.44
PROM1-211ENST00000511153 CTAGE5O15320 804 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 ADAMTS4O75173 837 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 DUSP11O75319 330 aaKnown RBP6.08□□□□□ -1.44
PROM1-211ENST00000511153 PSMD10O75832 226 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 ASGR1P07306 291 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 MMP3P08254 477 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 GCFC2P16383 781 aaKnown RBP6.08□□□□□ -1.44
PROM1-211ENST00000511153 CYP3A7P24462 503 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 ICAM3P32942 547 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 ME1P48163 572 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 NUCB2P80303 420 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 SETQ01105 290 aaPredicted RBP6.08□□□□□ -1.44
PROM1-211ENST00000511153 PTPAQ15257 358 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 ECM1Q16610 540 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 PPP2R2DQ66LE6 453 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 MCTP2Q6DN12 878 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 PPP4R3AQ6IN85 833 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 XRRA1Q6P2D8 792 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 DTHD1Q6ZMT9 781 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 MAEAQ7L5Y9 396 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 CCDC60Q8IWA6 550 aaPredicted RBP6.08□□□□□ -1.44
PROM1-211ENST00000511153 TPH2Q8IWU9 490 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 MSL3Q8N5Y2 521 aaKnown RBP6.08□□□□□ -1.44
PROM1-211ENST00000511153 PDILTQ8N807 584 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 RASSF8Q8NHQ8 419 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 THAP11Q96EK4 314 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 EPSTI1Q96J88 318 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 SPATA32Q96LK8 384 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 MBOAT7Q96N66 472 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 ZNF396Q96N95 335 aaPredicted RBP6.08□□□□□ -1.44
PROM1-211ENST00000511153 MTMR9Q96QG7 549 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 PCYT2Q99447 389 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 MTRQ99707 1265 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 SENP6Q9GZR1 1112 aaPredicted RBP6.08□□□□□ -1.44
PROM1-211ENST00000511153 CSRNP2Q9H175 543 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 ZSCAN16Q9H4T2 348 aaPredicted RBP6.08□□□□□ -1.44
PROM1-211ENST00000511153 KCNMB3Q9NPA1 279 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 WRAP73Q9P2S5 460 aaPredicted RBP6.08□□□□□ -1.44
PROM1-211ENST00000511153 PCDHA12Q9UN75 941 aa6.08□□□□□ -1.44
PROM1-211ENST00000511153 MYH9P35579 1960 aaKnown RBP6.08□□□□□ -1.44
PROM1-211ENST00000511153 SPTLC2O15270 562 aa6.07□□□□□ -1.44
PROM1-211ENST00000511153 GADD45BO75293 160 aaPredicted RBP6.07□□□□□ -1.44
PROM1-211ENST00000511153 MED24O75448 989 aa6.07□□□□□ -1.44
PROM1-211ENST00000511153 AP1G2O75843 785 aa6.07□□□□□ -1.44
PROM1-211ENST00000511153 SGPL1O95470 568 aa6.07□□□□□ -1.44
PROM1-211ENST00000511153 LGALS2P05162 132 aa6.07□□□□□ -1.44
PROM1-211ENST00000511153 SSBP05455 408 aaKnown RBP eCLIP6.07□□□□□ -1.44
PROM1-211ENST00000511153 SUPT20HL2P0C7V6 817 aa6.07□□□□□ -1.44
PROM1-211ENST00000511153 ACLYP53396 1101 aa6.07□□□□□ -1.44
PROM1-211ENST00000511153 KRT85P78386 507 aa6.07□□□□□ -1.44
PROM1-211ENST00000511153 ATP2C1P98194 919 aaPredicted RBP6.07□□□□□ -1.44
PROM1-211ENST00000511153 LAMC2Q13753 1193 aa6.07□□□□□ -1.44
PROM1-211ENST00000511153 NEDD9Q14511 834 aa6.07□□□□□ -1.44
PROM1-211ENST00000511153 KARSQ15046 597 aaKnown RBP6.07□□□□□ -1.44
PROM1-211ENST00000511153 TUSC1Q2TAM9 212 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms