RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 GABRDO14764 452 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 KDM1AO60341 852 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 FBXO21O94952 628 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 AOAHP28039 575 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 EPHB1P54762 984 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 SCAND1P57086 179 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 ERVK-21P61565 698 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 CACNB2Q08289 660 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 KLF1Q13351 362 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 TTF1Q15361 905 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 PRAMEF18Q5VWM3 479 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 CD276Q5ZPR3 534 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 TMEM132EQ6IEE7 984 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 PRR23BQ6ZRT6 265 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 FAM26EQ8N5C1 309 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 FOXRED1Q96CU9 486 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 ZNF496Q96IT1 587 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 MS4A5Q9H3V2 200 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 BTBD7Q9P203 1132 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 MSRAQ9UJ68 235 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 THRAP3Q9Y2W1 955 aaKnown RBP5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 IRS2Q9Y4H2 1338 aa5.48□□□□□ -1.53
HMGB1P28-201ENST00000507778 UBA6A0AVT1 1052 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 LCHNA4D1U4 455 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 TMEM253P0C7T8 217 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 PFKLP17858 780 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 FBLN1P23142 703 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 PTGS1P23219 599 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 NEK2P51955 445 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 PFKPQ01813 784 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 TTC38Q5R3I4 469 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 VASNQ6EMK4 673 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 TIGD7Q6NT04 549 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 ESPNLQ6ZVH7 1005 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 RTN4RL1Q86UN2 441 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 CILP2Q8IUL8 1156 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 PHYKPLQ8IUZ5 450 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 CBARPQ8N350 705 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 C7orf31Q8N865 590 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 TUBGCP5Q96RT8 1024 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 CNTD2Q9H8S5 307 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 PCDH18Q9HCL0 1135 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 SLC39A2Q9NP94 309 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 UCKL1Q9NWZ5 548 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 TCEAL9Q9UHQ7 104 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 TNKSO95271 1327 aa5.47□□□□□ -1.53
HMGB1P28-201ENST00000507778 TEX51A0A1B0GUA7 166 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 MYOCOSA0A1B0GUC4 107 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 SHTN1A0MZ66 631 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 LRRC10BA6NIK2 292 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 MARCH6O60337 910 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 CFBP00751 764 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 C8BP07358 591 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 MYBL2P10244 700 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 ATF2P15336 505 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 NCKAP1LP55160 1127 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 PDCD1Q15116 288 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 MLANAQ16655 118 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 PTPN21Q16825 1174 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 ABCB5Q2M3G0 1257 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 INAVAQ3KP66 663 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 TMC5Q6UXY8 1006 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 LIPIQ6XZB0 460 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 ZBTB46Q86UZ6 589 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 PROSER1Q86XN7 944 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 IGDCC4Q8TDY8 1250 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 MZB1Q8WU39 189 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 LMBR1Q8WVP7 490 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 CHMP4CQ96CF2 233 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 MAML3Q96JK9 1138 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 ACAP3Q96P50 834 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 TMEM209Q96SK2 561 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 MCOLN1Q9GZU1 580 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 RBPJLQ9UBG7 517 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 MBD1Q9UIS9 605 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 PCDHA5Q9Y5H7 936 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 EID1Q9Y6B2 187 aa5.46□□□□□ -1.54
HMGB1P28-201ENST00000507778 ZNF839A8K0R7 811 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 NFIBO00712 420 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 SEMA7AO75326 666 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 APOL3O95236 402 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 CYP2C8P10632 490 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 TAL1P17542 331 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 CCND1P24385 295 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 MC4RP32245 332 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 IARSP41252 1262 aaKnown RBP5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 MC3RP41968 323 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 CDR1P51861 262 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 SLC6A3Q01959 620 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 ALDH6A1Q02252 535 aaKnown RBP5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 ROM1Q03395 351 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 MCL1Q07820 350 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 PGM2L1Q6PCE3 622 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 B3GNT8Q7Z7M8 397 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 CMIPQ8IY22 773 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 SMARCC2Q8TAQ2 1214 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 CALML6Q8TD86 181 aa5.45□□□□□ -1.54
HMGB1P28-201ENST00000507778 FUBP3Q96I24 572 aaKnown RBP eCLIP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms