RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 MMTAG2Q9BU76 263 aaKnown RBP14.41□□□□□ -0.1
TCOF1-210ENST00000506767 ZSWIM4Q9H7M6 989 aa14.41□□□□□ -0.1
TCOF1-210ENST00000506767 TUFT1Q9NNX1 390 aa14.41□□□□□ -0.1
TCOF1-210ENST00000506767 GTF2IRD1Q9UHL9 959 aa14.41□□□□□ -0.1
TCOF1-210ENST00000506767 ALPK3Q96L96 1907 aa14.41□□□□□ -0.1
TCOF1-210ENST00000506767 MKI67P46013 3256 aaKnown RBP14.4□□□□□ -0.1
TCOF1-210ENST00000506767 POTEB3A0JP26 581 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 PP2D1A8MPX8 630 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 HBP1O60381 514 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 DKC1O60832 514 aaKnown RBP eCLIP14.4□□□□□ -0.1
TCOF1-210ENST00000506767 MED24O75448 989 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 CD4P01730 458 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 OATP04181 439 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 CDC25AP30304 524 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 PRKCEQ02156 737 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 CYP4A11Q02928 519 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 XKR3Q5GH77 459 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 HYIQ5T013 277 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 HAUS3Q68CZ6 603 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 POTEBQ6S5H4 581 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 FAM126BQ8IXS8 530 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 C7orf31Q8N865 590 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 KCNG4Q8TDN1 519 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 TNPO1Q92973 898 aaKnown RBP14.4□□□□□ -0.1
TCOF1-210ENST00000506767 FAM167AQ96KS9 214 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 CLIC6Q96NY7 704 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 NIFKQ9BYG3 293 aaKnown RBP14.4□□□□□ -0.1
TCOF1-210ENST00000506767 CSRNP2Q9H175 543 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 NRBP2Q9NSY0 501 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 MROH7Q68CQ1 1323 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 NRCAMQ92823 1304 aa14.4□□□□□ -0.1
TCOF1-210ENST00000506767 ZBTB42B2RXF5 422 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 SLC26A4O43511 780 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 INSRRP14616 1297 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 RTP1P59025 263 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 CHMP4BP1P59074 171 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 ECM1Q16610 540 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 TRIM60Q495X7 471 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 AXDND1Q5T1B0 1012 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-210ENST00000506767 KRT79Q5XKE5 535 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 GDF6Q6KF10 455 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-210ENST00000506767 ANO5Q75V66 913 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 TPH2Q8IWU9 490 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 ZNF579Q8NAF0 562 aaKnown RBP14.39□□□□□ -0.11
TCOF1-210ENST00000506767 LEO1Q8WVC0 666 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-210ENST00000506767 CTAGE1Q96RT6 745 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 CEP89Q96ST8 783 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 SCAND2PQ9GZW5 306 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-210ENST00000506767 SETD4Q9NVD3 440 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 PCDHA7Q9UN72 937 aa14.39□□□□□ -0.11
TCOF1-210ENST00000506767 COL1A2P08123 1366 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 C17orf102A2RUQ5 167 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 MBLAC1A4D2B0 266 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-210ENST00000506767 RRN3P2A6NIE6 340 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 B4GALT4O60513 344 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 CUTAO60888 179 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 XRCC6P12956 609 aaKnown RBP eCLIP14.38□□□□□ -0.11
TCOF1-210ENST00000506767 NCLP19338 710 aaKnown RBP14.38□□□□□ -0.11
TCOF1-210ENST00000506767 CCT6AP40227 531 aaKnown RBP14.38□□□□□ -0.11
TCOF1-210ENST00000506767 TLE2Q04725 743 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 PPFIA1Q13136 1202 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 TARBP2Q15633 366 aaKnown RBP14.38□□□□□ -0.11
TCOF1-210ENST00000506767 GRIK4Q16099 956 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 FAM47CQ5HY64 1035 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 ZNF484Q5JVG2 852 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 MARCH8Q5T0T0 291 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 USP49Q70CQ1 688 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 CKAP2LQ8IYA6 745 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 SNX29Q8TEQ0 813 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 LMBR1Q8WVP7 490 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 SPATA32Q96LK8 384 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 HTATIP2Q9BUP3 242 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 CCSER1Q9C0I3 900 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 TRPC6Q9Y210 931 aa14.38□□□□□ -0.11
TCOF1-210ENST00000506767 ZBTB39O15060 712 aa14.37□□□□□ -0.11
TCOF1-210ENST00000506767 GNAT1P11488 350 aa14.37□□□□□ -0.11
TCOF1-210ENST00000506767 YWHABP31946 246 aaKnown RBP14.37□□□□□ -0.11
TCOF1-210ENST00000506767 ZNF200P98182 395 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-210ENST00000506767 FAAP100Q0VG06 881 aa14.37□□□□□ -0.11
TCOF1-210ENST00000506767 GRB10Q13322 594 aa14.37□□□□□ -0.11
TCOF1-210ENST00000506767 SPECC1Q5M775 1068 aa14.37□□□□□ -0.11
TCOF1-210ENST00000506767 POTEGQ6S5H5 508 aa14.37□□□□□ -0.11
TCOF1-210ENST00000506767 CABP7Q86V35 215 aa14.37□□□□□ -0.11
TCOF1-210ENST00000506767 KCTD17Q8N5Z5 321 aa14.37□□□□□ -0.11
TCOF1-210ENST00000506767 EPSTI1Q96J88 318 aa14.37□□□□□ -0.11
TCOF1-210ENST00000506767 PNMA5Q96PV4 448 aa14.37□□□□□ -0.11
TCOF1-210ENST00000506767 TRPV6Q9H1D0 765 aa14.37□□□□□ -0.11
TCOF1-210ENST00000506767 ANKEF1Q9NU02 776 aa14.37□□□□□ -0.11
TCOF1-210ENST00000506767 TRMT13Q9NUP7 481 aaKnown RBP14.37□□□□□ -0.11
TCOF1-210ENST00000506767 KAT6AQ92794 2004 aa14.37□□□□□ -0.11
TCOF1-210ENST00000506767 TRIP12Q14669 1992 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-210ENST00000506767 TMEM150BA6NC51 233 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 DDX11L8A8MPP1 907 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 DCDC2CA8MYV0 355 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 TLR3O15455 904 aaKnown RBP14.36□□□□□ -0.11
TCOF1-210ENST00000506767 TREHO43280 583 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 PQBP1O60828 265 aaKnown RBP14.36□□□□□ -0.11
TCOF1-210ENST00000506767 UBA7P41226 1012 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 ME1P48163 572 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 PTGISQ16647 500 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms