RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 MTMR1Q13613 665 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 CES5AQ6NT32 575 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 POTEHQ6S545 545 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 TRIM50Q86XT4 487 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 CRIPAKQ8N1N5 446 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 NCOA7Q8NI08 942 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 RASGRP4Q8TDF6 673 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 RIPOR3Q96MK2 946 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 NECTIN4Q96NY8 510 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 MTA3Q9BTC8 594 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 CELF4Q9BZC1 486 aaKnown RBP11.36□□□□□ -0.59
NEDD9-210ENST00000505589 OSBPL7Q9BZF2 842 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 LNPKQ9C0E8 428 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 BCAS3Q9H6U6 928 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 PSTPIP2Q9H939 334 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 IGSF9BQ9UPX0 1349 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 GSTTP1A0A1W2PQM5 241 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 DENND3A2RUS2 1198 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 PROB1E7EW31 1015 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 HOXA2O43364 376 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 PPFIA3O75145 1194 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 KRT76Q01546 638 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 SEMA3FQ13275 785 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 PTPN21Q16825 1174 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 TPRNQ4KMQ1 711 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 RUFY4Q6ZNE9 571 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 SLC24A5Q71RS6 500 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 RTN4RL1Q86UN2 441 aaPredicted RBP11.35□□□□□ -0.59
NEDD9-210ENST00000505589 ATP8B4Q8TF62 1192 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 SUSD6Q92537 303 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 SDF4Q9BRK5 362 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 SPZ1Q9BXG8 430 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 TRPC6Q9Y210 931 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 MYO7AQ13402 2215 aa11.35□□□□□ -0.59
NEDD9-210ENST00000505589 ZNF318Q5VUA4 2279 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 MEIS2O14770 477 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 CYTH3O43739 400 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 ABCB7O75027 752 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 RPS6KA5O75582 802 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 FGF18O76093 207 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 CSPG5O95196 566 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 KCNA2P16389 499 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 LAG3P18627 525 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 MARK3P27448 753 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 STAT5BP51692 787 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 IGBP1P78318 339 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 PLCB3Q01970 1234 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 ITIH3Q06033 890 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 NFX1Q12986 1120 aaKnown RBP11.34□□□□□ -0.59
NEDD9-210ENST00000505589 DUSP6Q16828 381 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 PAN2Q504Q3 1202 aaKnown RBP11.34□□□□□ -0.59
NEDD9-210ENST00000505589 MARCH8Q5T0T0 291 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 MCTP2Q6DN12 878 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 USP17L6PQ6QN14 398 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 ERMP1Q7Z2K6 904 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 CHD1LQ86WJ1 897 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 PLEKHM2Q8IWE5 1019 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 THNSL1Q8IYQ7 743 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 PLCD3Q8N3E9 789 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 TMEM87AQ8NBN3 555 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 CASP10Q92851 521 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 ASIC4Q96FT7 647 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 FAM49AQ9H0Q0 323 aaPredicted RBP11.34□□□□□ -0.59
NEDD9-210ENST00000505589 ELAC1Q9H777 363 aaKnown RBP11.34□□□□□ -0.59
NEDD9-210ENST00000505589 AGO3Q9H9G7 860 aaKnown RBP11.34□□□□□ -0.59
NEDD9-210ENST00000505589 ATP6V0A4Q9HBG4 840 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 JPH1Q9HDC5 661 aaPredicted RBP11.34□□□□□ -0.59
NEDD9-210ENST00000505589 JADE2Q9NQC1 790 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 RGS18Q9NS28 235 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 TMEM260Q9NX78 707 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 SLC9A2Q9UBY0 812 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 BARX2Q9UMQ3 279 aaPredicted RBP11.34□□□□□ -0.59
NEDD9-210ENST00000505589 SORCS3Q9UPU3 1222 aa11.34□□□□□ -0.59
NEDD9-210ENST00000505589 TECTAO75443 2155 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
NEDD9-210ENST00000505589 HBP1O60381 514 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 ATP9AO75110 1047 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 CALM1P0DP23 149 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 CALM2P0DP24 149 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 CALM3P0DP25 149 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 DNAJB1P25685 340 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 PPM1AP35813 382 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 MTMR3Q13615 1198 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 ADGRD2Q7Z7M1 963 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 SMC5Q8IY18 1101 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 RSPH1Q8WYR4 309 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 MRPS27Q92552 414 aaKnown RBP11.33□□□□□ -0.6
NEDD9-210ENST00000505589 PHOX2BQ99453 314 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 UBIAD1Q9Y5Z9 338 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 USP34Q70CQ2 3546 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 C5orf42Q9H799 3197 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 NFASCO94856 1347 aa11.33□□□□□ -0.6
NEDD9-210ENST00000505589 TBKBP1A7MCY6 615 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 H0Y858 1186 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 PER2O15055 1255 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 DDAH1O94760 285 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 FOSP01100 380 aaPredicted RBP11.32□□□□□ -0.6
NEDD9-210ENST00000505589 ZSCAN20P17040 1043 aaPredicted RBP11.32□□□□□ -0.6
NEDD9-210ENST00000505589 TECP42680 631 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 GIT2Q14161 759 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms