RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 STK38Q15208 465 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 PTPAQ15257 358 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 IL17AQ16552 155 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 PTGISQ16647 500 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 UGCGQ16739 394 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 WDR81Q562E7 1941 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 ZNF484Q5JVG2 852 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 GDF6Q6KF10 455 aaPredicted RBP20.4■□□□□ 0.86
DDR1-252ENST00000504152 FTOQ9C0B1 505 aaKnown RBP eCLIP20.4■□□□□ 0.86
DDR1-252ENST00000504152 TMEM39AQ9NV64 488 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 RGL1Q9NZL6 768 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 CIZ1Q9ULV3 898 aaPredicted RBP20.4■□□□□ 0.86
DDR1-252ENST00000504152 IGSF9BQ9UPX0 1349 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 DDX11L8A8MPP1 907 aa20.39■□□□□ 0.85
DDR1-252ENST00000504152 ZNF862O60290 1169 aa20.39■□□□□ 0.85
DDR1-252ENST00000504152 OATP04181 439 aa20.39■□□□□ 0.85
DDR1-252ENST00000504152 CLTBP09497 229 aa20.39■□□□□ 0.85
DDR1-252ENST00000504152 NASPP49321 788 aaPredicted RBP20.39■□□□□ 0.85
DDR1-252ENST00000504152 CYP4A11Q02928 519 aa20.39■□□□□ 0.85
DDR1-252ENST00000504152 CTTNQ14247 550 aaKnown RBP20.39■□□□□ 0.85
DDR1-252ENST00000504152 GRIK4Q16099 956 aa20.39■□□□□ 0.85
DDR1-252ENST00000504152 XKR3Q5GH77 459 aa20.39■□□□□ 0.85
DDR1-252ENST00000504152 OTUD6AQ7L8S5 288 aa20.39■□□□□ 0.85
DDR1-252ENST00000504152 C4orf19Q8IY42 314 aa20.39■□□□□ 0.85
DDR1-252ENST00000504152 C7orf61Q8IZ16 206 aa20.39■□□□□ 0.85
DDR1-252ENST00000504152 AK8Q96MA6 479 aa20.39■□□□□ 0.85
DDR1-252ENST00000504152 IPO9Q96P70 1041 aaKnown RBP20.39■□□□□ 0.85
DDR1-252ENST00000504152 POLR3CQ9BUI4 534 aaPredicted RBP20.39■□□□□ 0.85
DDR1-252ENST00000504152 TUFT1Q9NNX1 390 aa20.39■□□□□ 0.85
DDR1-252ENST00000504152 TRMT13Q9NUP7 481 aaKnown RBP20.39■□□□□ 0.85
DDR1-252ENST00000504152 PRKAG2Q9UGJ0 569 aa20.39■□□□□ 0.85
DDR1-252ENST00000504152 YEATS4O95619 227 aa20.38■□□□□ 0.85
DDR1-252ENST00000504152 RPA1P27694 616 aa20.38■□□□□ 0.85
DDR1-252ENST00000504152 MARCKSP29966 332 aaPredicted RBP20.38■□□□□ 0.85
DDR1-252ENST00000504152 LONP1P36776 959 aaKnown RBP20.38■□□□□ 0.85
DDR1-252ENST00000504152 IGBP1P78318 339 aa20.38■□□□□ 0.85
DDR1-252ENST00000504152 PRKCEQ02156 737 aa20.38■□□□□ 0.85
DDR1-252ENST00000504152 DNM1Q05193 864 aaKnown RBP20.38■□□□□ 0.85
DDR1-252ENST00000504152 KRT79Q5XKE5 535 aa20.38■□□□□ 0.85
DDR1-252ENST00000504152 HAUS3Q68CZ6 603 aa20.38■□□□□ 0.85
DDR1-252ENST00000504152 LINC00301Q8NCQ3 95 aa20.38■□□□□ 0.85
DDR1-252ENST00000504152 LXNQ9BS40 222 aa20.38■□□□□ 0.85
DDR1-252ENST00000504152 SRPRBQ9Y5M8 271 aaKnown RBP20.38■□□□□ 0.85
DDR1-252ENST00000504152 MORC2Q9Y6X9 1032 aaPredicted RBP20.38■□□□□ 0.85
DDR1-252ENST00000504152 COL1A2P08123 1366 aa20.37■□□□□ 0.85
DDR1-252ENST00000504152 SPTLC2O15270 562 aa20.37■□□□□ 0.85
DDR1-252ENST00000504152 MUTP22033 750 aa20.37■□□□□ 0.85
DDR1-252ENST00000504152 HOXC8P31273 242 aa20.37■□□□□ 0.85
DDR1-252ENST00000504152 ZNF200P98182 395 aaPredicted RBP20.37■□□□□ 0.85
DDR1-252ENST00000504152 CATSPER3Q86XQ3 398 aa20.37■□□□□ 0.85
DDR1-252ENST00000504152 LMBR1Q8WVP7 490 aa20.37■□□□□ 0.85
DDR1-252ENST00000504152 NIFKQ9BYG3 293 aaKnown RBP20.37■□□□□ 0.85
DDR1-252ENST00000504152 MYH15Q9Y2K3 1946 aa20.37■□□□□ 0.85
DDR1-252ENST00000504152 TREHO43280 583 aa20.36■□□□□ 0.85
DDR1-252ENST00000504152 PPP6R2O75170 966 aa20.36■□□□□ 0.85
DDR1-252ENST00000504152 SPATA31C1P0DKV0 1188 aa20.36■□□□□ 0.85
DDR1-252ENST00000504152 XRCC6P12956 609 aaKnown RBP eCLIP20.36■□□□□ 0.85
DDR1-252ENST00000504152 CCT6AP40227 531 aaKnown RBP20.36■□□□□ 0.85
DDR1-252ENST00000504152 ADAM17P78536 824 aa20.36■□□□□ 0.85
DDR1-252ENST00000504152 PTK7Q13308 1070 aa20.36■□□□□ 0.85
DDR1-252ENST00000504152 HIC1Q14526 733 aa20.36■□□□□ 0.85
DDR1-252ENST00000504152 HABP4Q5JVS0 413 aaKnown RBP20.36■□□□□ 0.85
DDR1-252ENST00000504152 KRI1Q8N9T8 703 aaKnown RBP20.36■□□□□ 0.85
DDR1-252ENST00000504152 PRDM5Q9NQX1 630 aaPredicted RBP20.36■□□□□ 0.85
DDR1-252ENST00000504152 SEPT9Q9UHD8 586 aaPredicted RBP20.36■□□□□ 0.85
DDR1-252ENST00000504152 TRIP12Q14669 1992 aaPredicted RBP20.35■□□□□ 0.85
DDR1-252ENST00000504152 MED24O75448 989 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 STBD1O95210 358 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 LYPLA2O95372 231 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 CYP2C9P11712 490 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 NCLP19338 710 aaKnown RBP20.35■□□□□ 0.85
DDR1-252ENST00000504152 KLRC1P26715 233 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 YWHABP31946 246 aaKnown RBP20.35■□□□□ 0.85
DDR1-252ENST00000504152 UBA7P41226 1012 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 KRT85P78386 507 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 MARCH8Q5T0T0 291 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 KCNG4Q8TDN1 519 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 SNX29Q8TEQ0 813 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 NACC1Q96RE7 527 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 CHMP5Q9NZZ3 219 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 WRAP73Q9P2S5 460 aaPredicted RBP20.35■□□□□ 0.85
DDR1-252ENST00000504152 TUBE1Q9UJT0 475 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 FBXO2Q9UK22 296 aaPredicted RBP20.35■□□□□ 0.85
DDR1-252ENST00000504152 RCOR1Q9UKL0 485 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 ALPK3Q96L96 1907 aa20.35■□□□□ 0.85
DDR1-252ENST00000504152 KIAA0355O15063 1070 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 MAGEB2O15479 319 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 CDC25AP30304 524 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 BFSP2Q13515 415 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 MTHFD1LQ6UB35 978 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 ANO5Q75V66 913 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 SH3RF1Q7Z6J0 888 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 SERINC5Q86VE9 423 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 EXOC8Q8IYI6 725 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 CCDC155Q8N6L0 562 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 RETREG2Q8NC44 543 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 TRAPPC12Q8WVT3 735 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 PDLIM7Q9NR12 457 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 ANKEF1Q9NU02 776 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 PPME1Q9Y570 386 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms