RNA–Protein interactions for RNA: ENST00000499860.6

CD164-206, Transcript of CD164 molecule, humanhuman

TSL 1 (best)

Gene CD164, Length 2,845 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-206ENST00000499860 NECTIN1Q15223 517 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 CDC37Q16543 378 aaPredicted RBP2.38□□□□□ -2.03
CD164-206ENST00000499860 CFAP70Q5T0N1 1121 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 EMC10Q5UCC4 262 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 NUGGCQ68CJ6 796 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 CREB3L3Q68CJ9 461 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 ADALQ6DHV7 355 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 CCDC70Q6NSX1 233 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 BLOC1S2Q6QNY1 142 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 OLFM4Q6UX06 510 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 ZNF574Q6ZN55 896 aaPredicted RBP2.38□□□□□ -2.03
CD164-206ENST00000499860 LCA5Q86VQ0 697 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 SYCP3Q8IZU3 236 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 MCUQ8NE86 351 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 HELBQ8NG08 1087 aaPredicted RBP2.38□□□□□ -2.03
CD164-206ENST00000499860 CAGE1Q8TC20 777 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 AGAP11Q8TF27 550 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 MAIP1Q8WWC4 291 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 RUFY2Q8WXA3 655 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 ANKRD27Q96NW4 1050 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 MMS19Q96T76 1030 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 FAM167BQ9BTA0 163 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 PHACTR1Q9C0D0 580 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 ZCWPW1Q9H0M4 648 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 NDST4Q9H3R1 872 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 PCMTD2Q9NV79 361 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.38□□□□□ -2.033e-6■■□□□ 13.6
CD164-206ENST00000499860 PGAP2Q9UHJ9 254 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 PCDHA7Q9UN72 937 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 ZNF510Q9Y2H8 683 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 ZNF330Q9Y3S2 320 aaPredicted RBP2.38□□□□□ -2.03
CD164-206ENST00000499860 C2CD2Q9Y426 696 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 RBM8AQ9Y5S9 174 aaKnown RBP2.38□□□□□ -2.03
CD164-206ENST00000499860 NID2Q14112 1375 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 NUP98P52948 1817 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 USP42Q9H9J4 1324 aaKnown RBP2.38□□□□□ -2.03
CD164-206ENST00000499860 DPPA5A6NC42 116 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 C5orf60A6NFR6 353 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 CFAP73A6NFT4 308 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 PSMD14O00487 310 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 CAPN9O14815 690 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 ZNF189O75820 626 aaPredicted RBP2.38□□□□□ -2.03
CD164-206ENST00000499860 A1BGP04217 495 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 GSTA1P08263 222 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 FDX1P10109 184 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 DESP17661 470 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 RPL13P26373 211 aaKnown RBP2.38□□□□□ -2.03
CD164-206ENST00000499860 KIF5BP33176 963 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 PSMC4P43686 418 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 EPHB4P54760 987 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 INHBCP55103 352 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 ADAM9Q13443 819 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 SAFB2Q14151 953 aaKnown RBP eCLIP2.38□□□□□ -2.03
CD164-206ENST00000499860 PPP1R7Q15435 360 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 IFI16Q16666 785 aaKnown RBP2.38□□□□□ -2.03
CD164-206ENST00000499860 QPCTQ16769 361 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 ZNF827Q17R98 1081 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 SGSM1Q2NKQ1 1148 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 Q4G0T1 1027 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 HSP90AB4PQ58FF6 505 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 ZMYM1Q5SVZ6 1142 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 MFSD4BQ5TF39 518 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 SFMBT2Q5VUG0 894 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 KCTD16Q68DU8 428 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 PPP4R3AQ6IN85 833 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 IQCEQ6IPM2 695 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 CYP4F22Q6NT55 531 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 HIBCHQ6NVY1 386 aaPredicted RBP2.38□□□□□ -2.03
CD164-206ENST00000499860 FAM114A1Q8IWE2 563 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 CACNA2D3Q8IZS8 1091 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 CNBD1Q8NA66 436 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 TSEN2Q8NCE0 465 aaKnown RBP2.38□□□□□ -2.03
CD164-206ENST00000499860 EHBP1Q8NDI1 1231 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 ANKK1Q8NFD2 765 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 CCT6BQ92526 530 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 CAVIN3Q969G5 261 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 SEC16BQ96JE7 1060 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 ZIM3Q96PE6 472 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 UBE2OQ9C0C9 1292 aaKnown RBP2.38□□□□□ -2.03
CD164-206ENST00000499860 PIDD1Q9HB75 910 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 POLD4Q9HCU8 107 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 ANKIB1Q9P2G1 1089 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 TUBE1Q9UJT0 475 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 SLC12A4Q9UP95 1085 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 MAPK8IP1Q9UQF2 711 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 L3MBTL1Q9Y468 752 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 GMEB1Q9Y692 573 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 CREBBPQ92793 2442 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 MYH1P12882 1939 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 LOC285556D6RIA3 1793 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 KALRNO60229 2985 aa2.38□□□□□ -2.03
CD164-206ENST00000499860 LRRK2Q5S007 2527 aa2.37□□□□□ -2.03
CD164-206ENST00000499860 PNMA6EA0A0J9YXQ4 647 aa2.37□□□□□ -2.03
CD164-206ENST00000499860 HMGB1P1B2RPK0 211 aaPredicted RBP2.37□□□□□ -2.03
CD164-206ENST00000499860 PPIP5K2O43314 1243 aa2.37□□□□□ -2.03
CD164-206ENST00000499860 MFAP3LO75121 409 aa2.37□□□□□ -2.03
CD164-206ENST00000499860 ATP2C2O75185 946 aa2.37□□□□□ -2.03
CD164-206ENST00000499860 PENKP01210 267 aaPredicted RBP2.37□□□□□ -2.03
CD164-206ENST00000499860 ATP1A1P05023 1023 aaKnown RBP2.37□□□□□ -2.03
CD164-206ENST00000499860 MYBL1P10243 752 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms