RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RIT2Q99578 217 aa17.34■□□□□ 0.37
NUP50-219ENST00000497960 PHF20Q9BVI0 1012 aa17.34■□□□□ 0.37
NUP50-219ENST00000497960 FAM49AQ9H0Q0 323 aaPredicted RBP17.34■□□□□ 0.37
NUP50-219ENST00000497960 PCDHA2Q9Y5H9 948 aa17.34■□□□□ 0.37
NUP50-219ENST00000497960 WDR64B1ANS9 1081 aa17.33■□□□□ 0.36
NUP50-219ENST00000497960 M0QZ92 97 aa17.33■□□□□ 0.36
NUP50-219ENST00000497960 EDIL3O43854 480 aa17.33■□□□□ 0.36
NUP50-219ENST00000497960 CTDNEP1O95476 244 aa17.33■□□□□ 0.36
NUP50-219ENST00000497960 NPY5RQ15761 445 aa17.33■□□□□ 0.36
NUP50-219ENST00000497960 Q4G0T1 1027 aa17.33■□□□□ 0.36
NUP50-219ENST00000497960 IER5Q5VY09 327 aa17.33■□□□□ 0.36
NUP50-219ENST00000497960 MOXD1Q6UVY6 613 aa17.33■□□□□ 0.36
NUP50-219ENST00000497960 CCDC83Q8IWF9 413 aa17.33■□□□□ 0.36
NUP50-219ENST00000497960 TRAPPC12Q8WVT3 735 aa17.33■□□□□ 0.36
NUP50-219ENST00000497960 APBB2Q92870 758 aa17.33■□□□□ 0.36
NUP50-219ENST00000497960 TEKT3Q9BXF9 490 aa17.33■□□□□ 0.36
NUP50-219ENST00000497960 CYP3A7-CYP3A51PA0A087WV96 503 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 GJB5O95377 273 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 CYP3A7P24462 503 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 MRPS6P82932 125 aaKnown RBP17.32■□□□□ 0.36
NUP50-219ENST00000497960 INF2Q27J81 1249 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 ZNF484Q5JVG2 852 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 LRCH2Q5VUJ6 765 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 MTHFD1LQ6UB35 978 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 MYOCDQ8IZQ8 938 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 SLC5A5Q92911 643 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 ZBTB10Q96DT7 871 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 IFIH1Q9BYX4 1025 aaKnown RBP17.32■□□□□ 0.36
NUP50-219ENST00000497960 BRMS1Q9HCU9 246 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 DISC1Q9NRI5 854 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 GABBR1Q9UBS5 961 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 MAFBQ9Y5Q3 323 aaPredicted RBP17.32■□□□□ 0.36
NUP50-219ENST00000497960 CDY2AQ9Y6F7 541 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 GBF1Q92538 1859 aa17.32■□□□□ 0.36
NUP50-219ENST00000497960 COL1A2P08123 1366 aa17.31■□□□□ 0.36
NUP50-219ENST00000497960 DTNBO60941 627 aa17.31■□□□□ 0.36
NUP50-219ENST00000497960 TDP2O95551 362 aa17.31■□□□□ 0.36
NUP50-219ENST00000497960 GHRP10912 638 aa17.31■□□□□ 0.36
NUP50-219ENST00000497960 IGFBP4P22692 258 aa17.31■□□□□ 0.36
NUP50-219ENST00000497960 KLRC1P26715 233 aa17.31■□□□□ 0.36
NUP50-219ENST00000497960 SFNP31947 248 aa17.31■□□□□ 0.36
NUP50-219ENST00000497960 JAK3P52333 1124 aa17.31■□□□□ 0.36
NUP50-219ENST00000497960 MGAT3Q09327 533 aa17.31■□□□□ 0.36
NUP50-219ENST00000497960 FAM117BQ6P1L5 589 aa17.31■□□□□ 0.36
NUP50-219ENST00000497960 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.31■□□□□ 0.36
NUP50-219ENST00000497960 TMCO2Q7Z6W1 182 aaPredicted RBP17.31■□□□□ 0.36
NUP50-219ENST00000497960 NME8Q8N427 588 aa17.31■□□□□ 0.36
NUP50-219ENST00000497960 BBXQ8WY36 941 aaPredicted RBP17.31■□□□□ 0.36
NUP50-219ENST00000497960 FAM167AQ96KS9 214 aa17.31■□□□□ 0.36
NUP50-219ENST00000497960 RAD9AQ99638 391 aa17.31■□□□□ 0.36
NUP50-219ENST00000497960 DDX25Q9UHL0 483 aaKnown RBP17.31■□□□□ 0.36
NUP50-219ENST00000497960 SMIM35A0A1B0GVV1 85 aa17.3■□□□□ 0.36
NUP50-219ENST00000497960 CHMP2AO43633 222 aa17.3■□□□□ 0.36
NUP50-219ENST00000497960 TAP1Q03518 808 aa17.3■□□□□ 0.36
NUP50-219ENST00000497960 ST3GAL1Q11201 340 aa17.3■□□□□ 0.36
NUP50-219ENST00000497960 LETM2Q2VYF4 491 aa17.3■□□□□ 0.36
NUP50-219ENST00000497960 TRMT1LQ7Z2T5 733 aaKnown RBP17.3■□□□□ 0.36
NUP50-219ENST00000497960 NEK8Q86SG6 692 aa17.3■□□□□ 0.36
NUP50-219ENST00000497960 HSCBQ8IWL3 235 aa17.3■□□□□ 0.36
NUP50-219ENST00000497960 NSUN7Q8NE18 718 aaKnown RBP17.3■□□□□ 0.36
NUP50-219ENST00000497960 TMX3Q96JJ7 454 aa17.3■□□□□ 0.36
NUP50-219ENST00000497960 NAP1L4Q99733 375 aaKnown RBP17.3■□□□□ 0.36
NUP50-219ENST00000497960 OSBPL7Q9BZF2 842 aa17.3■□□□□ 0.36
NUP50-219ENST00000497960 GJB4Q9NTQ9 266 aa17.3■□□□□ 0.36
NUP50-219ENST00000497960 CEP131Q9UPN4 1083 aa17.3■□□□□ 0.36
NUP50-219ENST00000497960 TRPV2Q9Y5S1 764 aa17.3■□□□□ 0.36
NUP50-219ENST00000497960 COL6A3P12111 3177 aa17.3■□□□□ 0.36
NUP50-219ENST00000497960 FDPSP14324 419 aaKnown RBP17.29■□□□□ 0.36
NUP50-219ENST00000497960 GCFC2P16383 781 aaKnown RBP17.29■□□□□ 0.36
NUP50-219ENST00000497960 ATP4AP20648 1035 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 KRT2P35908 639 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
NUP50-219ENST00000497960 TRIM29Q14134 588 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 LPIN1Q14693 890 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 FBXO47Q5MNV8 452 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 TSHZ1Q6ZSZ6 1077 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 PIK3AP1Q6ZUJ8 805 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 USP38Q8NB14 1042 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 RDM1Q8NG50 284 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 MBOAT7Q96N66 472 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 UNC45AQ9H3U1 944 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 CERS4Q9HA82 394 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 NRBP2Q9NSY0 501 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 INSL6Q9Y581 213 aa17.29■□□□□ 0.36
NUP50-219ENST00000497960 MYH9P35579 1960 aaKnown RBP17.29■□□□□ 0.36
NUP50-219ENST00000497960 IGSF9BQ9UPX0 1349 aa17.28■□□□□ 0.36
NUP50-219ENST00000497960 RBAK-RBAKDNI3L0D1 243 aa17.28■□□□□ 0.36
NUP50-219ENST00000497960 PSMD10O75832 226 aa17.28■□□□□ 0.36
NUP50-219ENST00000497960 TMEM62Q0P6H9 643 aa17.28■□□□□ 0.36
NUP50-219ENST00000497960 ADGRE1Q14246 886 aa17.28■□□□□ 0.36
NUP50-219ENST00000497960 MIER3Q7Z3K6 550 aa17.28■□□□□ 0.36
NUP50-219ENST00000497960 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.28■□□□□ 0.36
NUP50-219ENST00000497960 OXER1Q8TDS5 423 aa17.28■□□□□ 0.36
NUP50-219ENST00000497960 ARNTL2Q8WYA1 636 aa17.28■□□□□ 0.36
NUP50-219ENST00000497960 GJA10Q969M2 543 aa17.28■□□□□ 0.36
NUP50-219ENST00000497960 CELF4Q9BZC1 486 aaKnown RBP17.28■□□□□ 0.36
NUP50-219ENST00000497960 SQORQ9Y6N5 450 aa17.28■□□□□ 0.36
NUP50-219ENST00000497960 MICAL3Q7RTP6 2002 aa17.28■□□□□ 0.36
NUP50-219ENST00000497960 LCHNA4D1U4 455 aa17.27■□□□□ 0.36
NUP50-219ENST00000497960 K7ELQ4 463 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms