RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 QSER1Q2KHR3 1735 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 TANC1Q9C0D5 1861 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 GREB1LQ9C091 1923 aaPredicted RBP3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 SRGAP3O43295 1099 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 ITGAVP06756 1048 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 BUD31P41223 144 aaPredicted RBP3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 WWC2Q6AWC2 1192 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 STK32CQ86UX6 486 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 ZNF227Q86WZ6 799 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 MCF2L2Q86YR7 1114 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 LZTR1Q8N653 840 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 FRS2Q8WU20 508 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 HNRNPLLQ8WVV9 542 aaKnown RBP3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 RCC1LQ96I51 464 aaKnown RBP3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 MTA3Q9BTC8 594 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 ST7Q9NRC1 585 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 SPTLC3Q9NUV7 552 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 NPHP4O75161 1426 aaPredicted RBP3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 DDAH1O94760 285 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 FUCA1P04066 466 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 SSBP05455 408 aaKnown RBP eCLIP3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 ASGR2P07307 311 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 LCP1P13796 627 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 NOP2P46087 812 aaKnown RBP3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 VWA3BQ502W6 1294 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 EXOC6Q8TAG9 804 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 NOX5Q96PH1 765 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 DBR1Q9UK59 544 aaKnown RBP3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 ZNF644Q9H582 1327 aaPredicted RBP3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 A0A087WZG4 1122 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 CT47B1P0C2W7 299 aaPredicted RBP3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 XRCC6P12956 609 aaKnown RBP eCLIP3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 CTSWP56202 376 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 CBX2Q14781 532 aaPredicted RBP3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 ZNF385BQ569K4 471 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 FAM26EQ8N5C1 309 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 FNIP1Q8TF40 1166 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 MYH4Q9Y623 1939 aa3.23□□□□□ -1.89
CDC42EP3-205ENST00000494083 ANKARQ7Z5J8 1434 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 IRS2Q9Y4H2 1338 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 TULP2O00295 520 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 CTIFO43310 598 aaKnown RBP3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 C20orf194Q5TEA3 1177 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 TRIM59Q8IWR1 403 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 FAM178BQ8IXR5 827 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 OR6P1Q8NGX9 317 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 MRGPRX3Q96LB0 322 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 FUCA2Q9BTY2 467 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 ACTR10Q9NZ32 417 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 LTBP1Q14766 1721 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 ARID2Q68CP9 1835 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 GJB6O95452 261 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 DLX2Q07687 328 aaPredicted RBP3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 PLEKHO2Q8TD55 490 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 USP33Q8TEY7 942 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 ANKRD7Q92527 254 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 CHMP4AQ9BY43 222 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 NKX2-4Q9H2Z4 354 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 LRRC37AA6NMS7 1700 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 CCDC88AQ3V6T2 1871 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 CRB1P82279 1406 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 PTPRUQ92729 1446 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 SBNO1A3KN83 1393 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 ABCC4O15439 1325 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 RFXAPO00287 272 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 SUSD5O60279 629 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 PAMP19021 973 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 ENDOUP21128 410 aaKnown RBP3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 ECI1P42126 302 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 GRB10Q13322 594 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 SV2CQ496J9 727 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 OLFML2BQ68BL8 750 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 SMARCC2Q8TAQ2 1214 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 NPLOC4Q8TAT6 608 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 SPATA25Q9BR10 227 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 BCL9O00512 1426 aa3.22□□□□□ -1.89
CDC42EP3-205ENST00000494083 IGHDP01880 384 aa3.21□□□□□ -1.89
CDC42EP3-205ENST00000494083 ZSCAN20P17040 1043 aaPredicted RBP3.21□□□□□ -1.89
CDC42EP3-205ENST00000494083 CORO7P57737 925 aa3.21□□□□□ -1.89
CDC42EP3-205ENST00000494083 SMAD4Q13485 552 aaKnown RBP3.21□□□□□ -1.89
CDC42EP3-205ENST00000494083 SYCP1Q15431 976 aa3.21□□□□□ -1.89
CDC42EP3-205ENST00000494083 SMAP1Q8IYB5 467 aaPredicted RBP3.21□□□□□ -1.89
CDC42EP3-205ENST00000494083 TMEM145Q8NBT3 493 aa3.21□□□□□ -1.89
CDC42EP3-205ENST00000494083 ALG3Q92685 438 aa3.21□□□□□ -1.89
CDC42EP3-205ENST00000494083 DDX11Q96FC9 970 aa3.21□□□□□ -1.89
CDC42EP3-205ENST00000494083 C1orf159Q96HA4 380 aa3.21□□□□□ -1.89
CDC42EP3-205ENST00000494083 RCAN3Q9UKA8 241 aa3.21□□□□□ -1.89
CDC42EP3-205ENST00000494083 STRCQ7RTU9 1775 aa3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 ABLIM1O14639 778 aa3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 PRICKLE3O43900 615 aaPredicted RBP3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 ZNF853P0CG23 659 aa3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 SLC10A6Q3KNW5 377 aa3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 YOD1Q5VVQ6 348 aaPredicted RBP3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 SCN4AP35499 1836 aa3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 OFD1O75665 1012 aa3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 PPP2R1AP30153 589 aa3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 KRTAP10-2P60368 255 aa3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 NR1I3Q14994 352 aa3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 LINC01356Q8N9X3 169 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms