RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 GALNT11Q8NCW6 608 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 GLIS3Q8NEA6 775 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 TBC1D22AQ8WUA7 517 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 LENG1Q96BZ8 264 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-213ENST00000494016 COA1Q9GZY4 146 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 CABP5Q9NP86 173 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 ANO10Q9NW15 660 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 VPS54Q9P1Q0 977 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 SAP30BPQ9UHR5 308 aaKnown RBP6.86□□□□□ -1.31
CPSF7-213ENST00000494016 TUBE1Q9UJT0 475 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 PCDHB6Q9Y5E3 794 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 SRPRBQ9Y5M8 271 aaKnown RBP6.86□□□□□ -1.31
CPSF7-213ENST00000494016 MORC2Q9Y6X9 1032 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-213ENST00000494016 FOCADQ5VW36 1801 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 ANKRD62A6NC57 917 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 C1QTNF9BB2RNN3 333 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 C9orf172C9J069 976 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 PTMAP06454 111 aaKnown RBP6.85□□□□□ -1.31
CPSF7-213ENST00000494016 ITPKAP23677 461 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 MSNP26038 577 aaKnown RBP6.85□□□□□ -1.31
CPSF7-213ENST00000494016 ALDH1B1P30837 517 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 KRT2P35908 639 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 PDE6BP35913 854 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 SYKP43405 635 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 CHRNA4P43681 627 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 NOVP48745 357 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 HTRA3P83110 453 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 PFKFB3Q16875 520 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-213ENST00000494016 LONRF3Q496Y0 759 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 CCDC178Q5BJE1 867 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 RILPL1Q5EBL4 403 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 MFSD14BQ5SR56 506 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 SARM1Q6SZW1 724 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 IGF2-ASQ6U949 168 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 KRBA2Q6ZNG9 492 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 C16orf86Q6ZW13 317 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 TEX11Q8IYF3 940 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 ZNF444Q8N0Y2 327 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-213ENST00000494016 JMYQ8N9B5 988 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 KLHL23Q8NBE8 558 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 MASTLQ96GX5 879 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 TMEM47Q9BQJ4 181 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 BPIFA3Q9BQP9 254 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 NOL10Q9BSC4 688 aaKnown RBP6.85□□□□□ -1.31
CPSF7-213ENST00000494016 MXD3Q9BW11 206 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 KCNF1Q9H3M0 494 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 TTC12Q9H892 705 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-213ENST00000494016 MKNK2Q9HBH9 465 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 ABCB6Q9NP58 842 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 OSGEPQ9NPF4 335 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 KIAA1522Q9P206 1035 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-213ENST00000494016 NRBP1Q9UHY1 535 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 MAD2L2Q9UI95 211 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 DAGLAQ9Y4D2 1042 aa6.85□□□□□ -1.31
CPSF7-213ENST00000494016 DDX60LQ5H9U9 1706 aaKnown RBP6.84□□□□□ -1.31
CPSF7-213ENST00000494016 SBF1O95248 1867 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 TMEM238LA0A1B0GVL6 79 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 SOX1O00570 391 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-213ENST00000494016 FOXN1O15353 648 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 ESRRAP11474 423 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-213ENST00000494016 SCG2P13521 617 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 DPEP1P16444 411 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 ATP2B1P20020 1258 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 KIF5BP33176 963 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 SARSP49591 514 aaKnown RBP6.84□□□□□ -1.31
CPSF7-213ENST00000494016 IKBKEQ14164 716 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 NCAPHQ15003 741 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 DPCR1Q3MIW9 517 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 EAPPQ56P03 285 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-213ENST00000494016 SPECC1Q5M775 1068 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 SHISA2Q6UWI4 295 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 USP49Q70CQ1 688 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 METTL16Q86W50 562 aaKnown RBP6.84□□□□□ -1.31
CPSF7-213ENST00000494016 C4orf32Q8N8J7 132 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 CTCFLQ8NI51 663 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-213ENST00000494016 UBXN4Q92575 508 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 BCO2Q9BYV7 579 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 ZC3H12CQ9C0D7 883 aaKnown RBP6.84□□□□□ -1.31
CPSF7-213ENST00000494016 CLEC4MQ9H2X3 399 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-213ENST00000494016 KAT14Q9H8E8 782 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 KCNQ5Q9NR82 932 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 KCNH3Q9ULD8 1083 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 SUGT1Q9Y2Z0 365 aa6.84□□□□□ -1.31
CPSF7-213ENST00000494016 BAZ2BQ9UIF8 2168 aaKnown RBP6.84□□□□□ -1.32
CPSF7-213ENST00000494016 FLT1P17948 1338 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 IGKV6D-41A0A0C4DH26 115 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 TRIM75PA6NK02 468 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 BIN1O00499 593 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 CYTH3O43739 400 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 TPM3P06753 285 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 TSPY3P0CV98 308 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 TSPY8P0CW00 308 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 XBP1P17861 261 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 KCNA3P22001 575 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 BMP6P22004 513 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 CHRNA5P30532 468 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 CD68P34810 354 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-213ENST00000494016 GNAQP50148 359 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 NRG1Q02297 640 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-213ENST00000494016 GABPAQ06546 454 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms