RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 CATSPER3Q86XQ3 398 aa20.05■□□□□ 0.8
PDLIM7-208ENST00000493815 FAM126BQ8IXS8 530 aa20.05■□□□□ 0.8
PDLIM7-208ENST00000493815 LMBR1Q8WVP7 490 aa20.05■□□□□ 0.8
PDLIM7-208ENST00000493815 DPF3Q92784 378 aa20.05■□□□□ 0.8
PDLIM7-208ENST00000493815 RAB34Q9BZG1 259 aa20.05■□□□□ 0.8
PDLIM7-208ENST00000493815 ATP6V1DQ9Y5K8 247 aa20.05■□□□□ 0.8
PDLIM7-208ENST00000493815 STBD1O95210 358 aa20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 OATP04181 439 aa20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 ZRSR1Q15695 479 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 GRIK4Q16099 956 aa20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 ECM1Q16610 540 aa20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 ANKRD33Q7Z3H0 272 aa20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 C7orf61Q8IZ16 206 aa20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 CTAGE1Q96RT6 745 aa20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 MMTAG2Q9BU76 263 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 HTATIP2Q9BUP3 242 aa20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 CSRNP2Q9H175 543 aa20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 CHMP5Q9NZZ3 219 aa20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 SEPT9Q9UHD8 586 aaPredicted RBP20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 CFAP45Q9UL16 551 aa20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 TNRC18O15417 2968 aaPredicted RBP20.04■□□□□ 0.8
PDLIM7-208ENST00000493815 C17orf102A2RUQ5 167 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 DDX11L8A8MPP1 907 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 RBAK-RBAKDNI3L0D1 243 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 YEATS4O95619 227 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 CCT6AP40227 531 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 RGS19P49795 217 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 PTGISQ16647 500 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 PLA2G4FQ68DD2 849 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 POTEGQ6S5H5 508 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 USP49Q70CQ1 688 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 ANO5Q75V66 913 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 SESTD1Q86VW0 696 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 ERMNQ8TAM6 284 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 SNX29Q8TEQ0 813 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 ZSWIM4Q9H7M6 989 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 GDPD2Q9HCC8 539 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 SRPRBQ9Y5M8 271 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 DCDC2CA8MYV0 355 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 ZBTB42B2RXF5 422 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 TREHO43280 583 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 HBP1O60381 514 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 CYP2C9P11712 490 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 KRT85P78386 507 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 FAAP100Q0VG06 881 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 MARCH8Q5T0T0 291 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 ATL3Q6DD88 541 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 SH3RF1Q7Z6J0 888 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 KRI1Q8N9T8 703 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 PIGOQ8TEQ8 1089 aa20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 BBXQ8WY36 941 aaPredicted RBP20.03■□□□□ 0.8
PDLIM7-208ENST00000493815 EVI5O60447 810 aa20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 CD4P01730 458 aa20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 RPA1P27694 616 aa20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 HOXC8P31273 242 aa20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 NPEPPSP55786 919 aa20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 XKR3Q5GH77 459 aa20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 KRT79Q5XKE5 535 aa20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 ZNF579Q8NAF0 562 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 EPSTI1Q96J88 318 aa20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 PLIN2Q99541 437 aa20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 POLR3CQ9BUI4 534 aaPredicted RBP20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 PRDM5Q9NQX1 630 aaPredicted RBP20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 NRBP2Q9NSY0 501 aa20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 NOD1Q9Y239 953 aa20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 MROH7Q68CQ1 1323 aa20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 NRCAMQ92823 1304 aa20.02■□□□□ 0.8
PDLIM7-208ENST00000493815 ALPK3Q96L96 1907 aa20.02■□□□□ 0.79
PDLIM7-208ENST00000493815 YWHABP31946 246 aaKnown RBP20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 LONP1P36776 959 aaKnown RBP20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 PTPN11Q06124 597 aaPredicted RBP20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 MTERF2Q49AM1 385 aa20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 HAUS3Q68CZ6 603 aa20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 C4orf19Q8IY42 314 aa20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 NEK9Q8TD19 979 aa20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 LEO1Q8WVC0 666 aaPredicted RBP20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 WNT8BQ93098 351 aa20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 FAM167AQ96KS9 214 aa20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 SPATA32Q96LK8 384 aa20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 TOX2Q96NM4 488 aa20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 TUFT1Q9NNX1 390 aa20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 WDR81Q562E7 1941 aa20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 MYH9P35579 1960 aaKnown RBP20.01■□□□□ 0.79
PDLIM7-208ENST00000493815 ME1P48163 572 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 ADAM17P78536 824 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 TPRNQ4KMQ1 711 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 KCNG4Q8TDN1 519 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 SEZ6LQ9BYH1 1024 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 TUBE1Q9UJT0 475 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 RCOR1Q9UKL0 485 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 KIAA1024Q9UPX6 916 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 TLR3O15455 904 aaKnown RBP20■□□□□ 0.79
PDLIM7-208ENST00000493815 PPP6R2O75170 966 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 CLTBP09497 229 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 SYN1P17600 705 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 RUFY4Q6ZNE9 571 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 CABP7Q86V35 215 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 SYMPKQ92797 1274 aaKnown RBP20■□□□□ 0.79
PDLIM7-208ENST00000493815 AK8Q96MA6 479 aa20■□□□□ 0.79
PDLIM7-208ENST00000493815 PDLIM7Q9NR12 457 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms