RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 IGBP1P78318 339 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 LRCH2Q5VUJ6 765 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 MIS18BP1Q6P0N0 1132 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 TRMT1LQ7Z2T5 733 aaKnown RBP11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 SESTD1Q86VW0 696 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 CKAP2LQ8IYA6 745 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 ATP6V0A1Q93050 837 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 GJA10Q969M2 543 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 SCLYQ96I15 445 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 TEKT3Q9BXF9 490 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 SETD4Q9NVD3 440 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 ERAP1Q9NZ08 941 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 TRPC6Q9Y210 931 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 TRANK1O15050 2925 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 CCNE2O96020 404 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 PFKMP08237 780 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 STAT5BP51692 787 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 KRT76Q01546 638 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 TAP1Q03518 808 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 BFSP2Q13515 415 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 EARS2Q5JPH6 523 aaKnown RBP11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 FAM160B1Q5W0V3 765 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 SWSAP1Q6NVH7 229 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 PDXDC2PQ6P474 469 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 DEFB128Q7Z7B8 93 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 HLA-CQ95604 372 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 LENG9Q96B70 501 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 NAP1L4Q99733 375 aaKnown RBP11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 RNPEPQ9H4A4 650 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 SMC3Q9UQE7 1217 aa11.76□□□□□ -0.53
TRAPPC12-222ENST00000493792 PITPNM1O00562 1244 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 DHX15O43143 795 aaKnown RBP11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 TREHO43280 583 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 GTPBP6O43824 516 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 SLC37A4O43826 429 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 EDIL3O43854 480 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 PSAPP07602 524 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 GCFC2P16383 781 aaKnown RBP11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 GJB2P29033 226 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 PPFIA1Q13136 1202 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 PTK7Q13308 1070 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 Q4G0T1 1027 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 ZNF746Q6NUN9 644 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 MOXD1Q6UVY6 613 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 SPRED2Q7Z698 418 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 TNPO1Q92973 898 aaKnown RBP11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 PCYT2Q99447 389 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 FTOQ9C0B1 505 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 ZNF302Q9NR11 478 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 EMSYQ7Z589 1322 aa11.75□□□□□ -0.53
TRAPPC12-222ENST00000493792 CYP3A7-CYP3A51PA0A087WV96 503 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 ZBBXA8MT70 800 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 WDR64B1ANS9 1081 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 H3BQV1 296 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 LGR5O75473 907 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 BAG4O95429 457 aaKnown RBP11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 CYP3A7P24462 503 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 RFC2P35250 354 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 THPOP40225 353 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 GRB10Q13322 594 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 HIC1Q14526 733 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 GRIK4Q16099 956 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 MCTP1Q6DN14 999 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 ABHD15Q6UXT9 468 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 MIER3Q7Z3K6 550 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 CCDC60Q8IWA6 550 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 SMAP1Q8IYB5 467 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 FBXO18Q8NFZ0 1043 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 CAGE1Q8TC20 777 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 PHOSPHO2Q8TCD6 241 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 LMBR1Q8WVP7 490 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 ARNTL2Q8WYA1 636 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 DHX38Q92620 1227 aaKnown RBP11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 SLC5A5Q92911 643 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 TNFRSF25Q93038 417 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 RIT2Q99578 217 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 UNC45AQ9H3U1 944 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 GABBR1Q9UBS5 961 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 PCDHA10Q9Y5I2 948 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 NRCAMQ92823 1304 aa11.74□□□□□ -0.53
TRAPPC12-222ENST00000493792 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 ATG7O95352 703 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 CTSHP09668 335 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 IQCF3P0C7M6 154 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 INSRRP14616 1297 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 SELPP16109 830 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 MCM7P33993 719 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 JAK3P52333 1124 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 PLCB4Q15147 1175 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 PPP4R3AQ6IN85 833 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 LRRC8DQ7L1W4 858 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 PLPPR4Q7Z2D5 763 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 AFAP1L1Q8TED9 768 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 MBOAT7Q96N66 472 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 CTAGE1Q96RT6 745 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 DISC1Q9NRI5 854 aa11.73□□□□□ -0.53
TRAPPC12-222ENST00000493792 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms