RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 CDHR1Q96JP9 859 aa17.02■□□□□ 0.32
CDC42SE1-205ENST00000491825 SUGCTQ9HAC7 445 aa17.02■□□□□ 0.32
CDC42SE1-205ENST00000491825 ZNF215Q9UL58 517 aaPredicted RBP17.02■□□□□ 0.32
CDC42SE1-205ENST00000491825 CCDC194A0A1B0GVG4 234 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 BTBD18B2RXH4 712 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 MAFGO15525 162 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 CTSHP09668 335 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 KCNQ1P51787 676 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 FOSBP53539 338 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 GUCY1B3Q02153 619 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 SP4Q02446 784 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 NR5A1Q13285 461 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 BECN1Q14457 450 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 SKIV2LQ15477 1246 aaKnown RBP17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 CEP55Q53EZ4 464 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 FAM117BQ6P1L5 589 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 MOXD1Q6UVY6 613 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 NLRX1Q86UT6 975 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 SP7Q8TDD2 431 aaPredicted RBP17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 TBCKQ8TEA7 893 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 TGS1Q96RS0 853 aaKnown RBP17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 JADE2Q9NQC1 790 aa17.01■□□□□ 0.31
CDC42SE1-205ENST00000491825 IGLV3-22A0A075B6J6 115 aa17■□□□□ 0.31
CDC42SE1-205ENST00000491825 GNAT1P11488 350 aa17■□□□□ 0.31
CDC42SE1-205ENST00000491825 U2AF2P26368 475 aaKnown RBP eCLIP17■□□□□ 0.31
CDC42SE1-205ENST00000491825 SETQ01105 290 aaPredicted RBP17■□□□□ 0.31
CDC42SE1-205ENST00000491825 MTMR1Q13613 665 aa17■□□□□ 0.31
CDC42SE1-205ENST00000491825 FAM26DQ5JW98 314 aa17■□□□□ 0.31
CDC42SE1-205ENST00000491825 UTP14CQ5TAP6 766 aaKnown RBP17■□□□□ 0.31
CDC42SE1-205ENST00000491825 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
CDC42SE1-205ENST00000491825 MYOCDQ8IZQ8 938 aa17■□□□□ 0.31
CDC42SE1-205ENST00000491825 GIMAP8Q8ND71 665 aaPredicted RBP17■□□□□ 0.31
CDC42SE1-205ENST00000491825 NECAB3Q96P71 396 aaPredicted RBP17■□□□□ 0.31
CDC42SE1-205ENST00000491825 MXRA8Q9BRK3 442 aa17■□□□□ 0.31
CDC42SE1-205ENST00000491825 LMCD1Q9NZU5 365 aa17■□□□□ 0.31
CDC42SE1-205ENST00000491825 MTUS1Q9ULD2 1270 aa17■□□□□ 0.31
CDC42SE1-205ENST00000491825 COG5Q9UP83 839 aa17■□□□□ 0.31
CDC42SE1-205ENST00000491825 COL4A6Q14031 1691 aa17■□□□□ 0.31
CDC42SE1-205ENST00000491825 NRCAMQ92823 1304 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 CYP3A7-CYP3A51PA0A087WV96 503 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 FAM86B1E9PN63 330 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 MEIS1O00470 390 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 EDIL3O43854 480 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 AMHP03971 560 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 HSP90AA1P07900 732 aaKnown RBP16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 FAM86B2P0C5J1 330 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 CYP3A7P24462 503 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 TCF7P36402 384 aaPredicted RBP16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 AAK1Q2M2I8 961 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 EARS2Q5JPH6 523 aaKnown RBP16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 LARP1BQ659C4 914 aaKnown RBP16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 NEK8Q86SG6 692 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 RPAINQ86UA6 219 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 NOSTRINQ8IVI9 506 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 SEPT8Q92599 483 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 MBOAT7Q96N66 472 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 INSL6Q9Y581 213 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 BDP1A6H8Y1 2624 aa16.99■□□□□ 0.31
CDC42SE1-205ENST00000491825 GSTTP1A0A1W2PQM5 241 aa16.98■□□□□ 0.31
CDC42SE1-205ENST00000491825 H3BQV1 296 aa16.98■□□□□ 0.31
CDC42SE1-205ENST00000491825 PDIA4P13667 645 aaKnown RBP16.98■□□□□ 0.31
CDC42SE1-205ENST00000491825 GCFC2P16383 781 aaKnown RBP16.98■□□□□ 0.31
CDC42SE1-205ENST00000491825 INF2Q27J81 1249 aa16.98■□□□□ 0.31
CDC42SE1-205ENST00000491825 PPP4R3AQ6IN85 833 aa16.98■□□□□ 0.31
CDC42SE1-205ENST00000491825 TOP1MTQ969P6 601 aa16.98■□□□□ 0.31
CDC42SE1-205ENST00000491825 LENG9Q96B70 501 aa16.98■□□□□ 0.31
CDC42SE1-205ENST00000491825 NAP1L4Q99733 375 aaKnown RBP16.98■□□□□ 0.31
CDC42SE1-205ENST00000491825 C17orf80Q9BSJ5 609 aa16.98■□□□□ 0.31
CDC42SE1-205ENST00000491825 ZNF76P36508 570 aa16.97■□□□□ 0.31
CDC42SE1-205ENST00000491825 MGAT3Q09327 533 aa16.97■□□□□ 0.31
CDC42SE1-205ENST00000491825 Q4G0T1 1027 aa16.97■□□□□ 0.31
CDC42SE1-205ENST00000491825 RUFY4Q6ZNE9 571 aa16.97■□□□□ 0.31
CDC42SE1-205ENST00000491825 CYP2W1Q8TAV3 490 aa16.97■□□□□ 0.31
CDC42SE1-205ENST00000491825 SEPT1Q8WYJ6 367 aa16.97■□□□□ 0.31
CDC42SE1-205ENST00000491825 HLA-CQ95604 372 aa16.97■□□□□ 0.31
CDC42SE1-205ENST00000491825 KCNH7Q9NS40 1196 aa16.97■□□□□ 0.31
CDC42SE1-205ENST00000491825 MICAL3Q7RTP6 2002 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 NCOR1O75376 2440 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 MBLAC1A4D2B0 266 aaPredicted RBP16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 FAM205CA6NFA0 338 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 CHRNA1P02708 482 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 SYT1P21579 422 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 TRAPPC10P48553 1259 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 PPFIA1Q13136 1202 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 GNL2Q13823 731 aaKnown RBP16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 MARCH8Q5T0T0 291 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 TAF2Q6P1X5 1199 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 APBB2Q92870 758 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 PCYT2Q99447 389 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 IFIH1Q9BYX4 1025 aaKnown RBP16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 ERAP1Q9NZ08 941 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 PKD2L1Q9P0L9 805 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 DOCK5Q9H7D0 1870 aa16.96■□□□□ 0.31
CDC42SE1-205ENST00000491825 NFASCO94856 1347 aa16.96■□□□□ 0.3
CDC42SE1-205ENST00000491825 TDP2O95551 362 aa16.95■□□□□ 0.3
CDC42SE1-205ENST00000491825 MARK3P27448 753 aa16.95■□□□□ 0.3
CDC42SE1-205ENST00000491825 ORC2Q13416 577 aaPredicted RBP16.95■□□□□ 0.3
CDC42SE1-205ENST00000491825 GRIK4Q16099 956 aa16.95■□□□□ 0.3
CDC42SE1-205ENST00000491825 LETM2Q2VYF4 491 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms